Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.86□□□□□ -0.03
SUMO3P55854 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 FAM220BP-201ENST00000377689 816 ntBASIC14.86□□□□□ -0.03
SUMO3P55854 HLA-H-201ENST00000383620 1096 ntBASIC14.86□□□□□ -0.03
SUMO3P55854 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.86□□□□□ -0.03
SUMO3P55854 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 AP006288.1-201ENST00000446065 395 ntBASIC14.86□□□□□ -0.03
SUMO3P55854 AC069335.1-201ENST00000489972 472 ntBASIC14.86□□□□□ -0.03
SUMO3P55854 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.86□□□□□ -0.03
SUMO3P55854 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.86□□□□□ -0.03
SUMO3P55854 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.86□□□□□ -0.03
SUMO3P55854 AC004835.2-201ENST00000603762 682 ntBASIC14.86□□□□□ -0.03
SUMO3P55854 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 AC023511.2-201ENST00000618803 211 ntBASIC14.86□□□□□ -0.03
SUMO3P55854 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 PCDHB19P-201ENST00000570871 2371 ntBASIC14.86□□□□□ -0.03
SUMO3P55854 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SUMO3P55854 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SUMO3P55854 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SUMO3P55854 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.85□□□□□ -0.03
SUMO3P55854 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.85□□□□□ -0.03
SUMO3P55854 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SUMO3P55854 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SUMO3P55854 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 AC254562.1-201ENST00000417586 456 ntBASIC14.85□□□□□ -0.03
SUMO3P55854 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.85□□□□□ -0.03
SUMO3P55854 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.85□□□□□ -0.03
SUMO3P55854 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.85□□□□□ -0.03
SUMO3P55854 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.85□□□□□ -0.03
SUMO3P55854 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.85□□□□□ -0.03
SUMO3P55854 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.85□□□□□ -0.03
SUMO3P55854 MIR4321-201ENST00000592276 80 ntBASIC14.85□□□□□ -0.03
SUMO3P55854 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SUMO3P55854 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SUMO3P55854 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SUMO3P55854 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SUMO3P55854 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms