Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC25A1P53007 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC25A1P53007 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
SLC25A1P53007 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SLC25A1P53007 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC25A1P53007 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SLC25A1P53007 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC25A1P53007 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.61□□□□□ -0.07
SLC25A1P53007 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC25A1P53007 AC117500.6-201ENST00000624871 588 ntBASIC14.61□□□□□ -0.07
SLC25A1P53007 FAM215A-202ENST00000632077 792 ntBASIC14.61□□□□□ -0.07
SLC25A1P53007 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC25A1P53007 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC25A1P53007 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC25A1P53007 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
SLC25A1P53007 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC25A1P53007 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SLC25A1P53007 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC25A1P53007 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC25A1P53007 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SLC25A1P53007 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
SLC25A1P53007 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 AC104640.1-201ENST00000562617 2109 ntBASIC14.6□□□□□ -0.07
SLC25A1P53007 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 AC008677.1-201ENST00000519230 1561 ntBASIC14.6□□□□□ -0.07
SLC25A1P53007 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
SLC25A1P53007 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.6□□□□□ -0.07
SLC25A1P53007 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 AL513480.1-201ENST00000451731 511 ntBASIC14.6□□□□□ -0.07
SLC25A1P53007 EMBP1-201ENST00000458200 901 ntBASIC14.6□□□□□ -0.07
SLC25A1P53007 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.6□□□□□ -0.07
SLC25A1P53007 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC25A1P53007 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC25A1P53007 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
SLC25A1P53007 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC25A1P53007 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC25A1P53007 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC25A1P53007 AC092384.3-202ENST00000564646 2873 ntBASIC14.59□□□□□ -0.07
SLC25A1P53007 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC25A1P53007 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
SLC25A1P53007 AC092919.2-201ENST00000623631 1645 ntBASIC14.59□□□□□ -0.07
SLC25A1P53007 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC25A1P53007 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC25A1P53007 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC25A1P53007 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SLC25A1P53007 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC25A1P53007 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC25A1P53007 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
SLC25A1P53007 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC25A1P53007 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC25A1P53007 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC25A1P53007 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC25A1P53007 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC25A1P53007 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms