Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.11■□□□□ 0.49
GPC3P51654 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.11■□□□□ 0.49
GPC3P51654 MIR4745-201ENST00000577608 62 ntBASIC18.11■□□□□ 0.49
GPC3P51654 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.11■□□□□ 0.49
GPC3P51654 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
GPC3P51654 AC020765.3-201ENST00000613051 740 ntBASIC18.11■□□□□ 0.49
GPC3P51654 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.11■□□□□ 0.49
GPC3P51654 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.11■□□□□ 0.49
GPC3P51654 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 GGT4P-201ENST00000623672 1708 ntBASIC18.11■□□□□ 0.49
GPC3P51654 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 GPAA1P2-202ENST00000606848 1787 ntBASIC18.11■□□□□ 0.49
GPC3P51654 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GPC3P51654 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 UBALD1-205ENST00000590891 2641 ntBASIC18.1■□□□□ 0.49
GPC3P51654 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GPC3P51654 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.1■□□□□ 0.49
GPC3P51654 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC3P51654 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC3P51654 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GPC3P51654 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC3P51654 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC3P51654 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC3P51654 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
GPC3P51654 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GPC3P51654 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC3P51654 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC3P51654 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC3P51654 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 AC093724.1-201ENST00000448659 1027 ntBASIC18.09■□□□□ 0.49
GPC3P51654 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC3P51654 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC3P51654 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.09■□□□□ 0.49
GPC3P51654 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GPC3P51654 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
GPC3P51654 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GPC3P51654 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC3P51654 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GPC3P51654 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
GPC3P51654 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC3P51654 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms