Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PRIM2P49643 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PRIM2P49643 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 SLC25A6P2-201ENST00000497974 877 ntBASIC15.72■□□□□ 0.11
PRIM2P49643 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.72■□□□□ 0.11
PRIM2P49643 MPDU1-223ENST00000582151 728 ntBASIC15.72■□□□□ 0.11
PRIM2P49643 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PRIM2P49643 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRIM2P49643 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PRIM2P49643 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.72■□□□□ 0.11
PRIM2P49643 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PRIM2P49643 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRIM2P49643 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PRIM2P49643 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PRIM2P49643 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PRIM2P49643 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 AC129492.6-201ENST00000611383 1305 ntBASIC15.71■□□□□ 0.11
PRIM2P49643 MTHFR-217ENST00000641820 1569 ntBASIC15.71■□□□□ 0.11
PRIM2P49643 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.71■□□□□ 0.11
PRIM2P49643 AL671710.1-201ENST00000610245 2349 ntBASIC15.71■□□□□ 0.11
PRIM2P49643 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.71■□□□□ 0.11
PRIM2P49643 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.71■□□□□ 0.11
PRIM2P49643 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.71■□□□□ 0.11
PRIM2P49643 IGHV3-65-201ENST00000523210 341 ntBASIC15.71■□□□□ 0.11
PRIM2P49643 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.71■□□□□ 0.11
PRIM2P49643 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.71■□□□□ 0.11
PRIM2P49643 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.71■□□□□ 0.11
PRIM2P49643 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRIM2P49643 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.71■□□□□ 0.11
PRIM2P49643 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.71■□□□□ 0.1
PRIM2P49643 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
PRIM2P49643 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.71■□□□□ 0.1
PRIM2P49643 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
PRIM2P49643 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.71■□□□□ 0.1
PRIM2P49643 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRIM2P49643 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 AC022188.1-201ENST00000620960 1664 ntBASIC15.7■□□□□ 0.1
PRIM2P49643 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.7■□□□□ 0.1
PRIM2P49643 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms