Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.05□□□□□ -0.32
CDC34P49427 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.05□□□□□ -0.32
CDC34P49427 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.05□□□□□ -0.32
CDC34P49427 NUS1P1-201ENST00000446295 882 ntBASIC13.05□□□□□ -0.32
CDC34P49427 TSPY20P-201ENST00000450910 630 ntBASIC13.05□□□□□ -0.32
CDC34P49427 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 COX11P1-201ENST00000489116 835 ntBASIC13.05□□□□□ -0.32
CDC34P49427 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.05□□□□□ -0.32
CDC34P49427 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.05□□□□□ -0.32
CDC34P49427 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.05□□□□□ -0.32
CDC34P49427 AC005336.2-201ENST00000593183 939 ntBASIC13.05□□□□□ -0.32
CDC34P49427 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CDC34P49427 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 KRT18P22-201ENST00000402024 1347 ntBASIC13.05□□□□□ -0.32
CDC34P49427 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CDC34P49427 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.05□□□□□ -0.32
CDC34P49427 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 AL031731.1-201ENST00000642131 2094 ntBASIC13.04□□□□□ -0.32
CDC34P49427 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.04□□□□□ -0.32
CDC34P49427 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CDC34P49427 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 AC104581.4-201ENST00000623126 3052 ntBASIC13.04□□□□□ -0.32
CDC34P49427 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CDC34P49427 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CDC34P49427 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.04□□□□□ -0.32
CDC34P49427 SNORA78-201ENST00000459373 127 ntBASIC13.04□□□□□ -0.32
CDC34P49427 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.04□□□□□ -0.32
CDC34P49427 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.04□□□□□ -0.32
CDC34P49427 RNF126P1-202ENST00000569893 925 ntBASIC13.04□□□□□ -0.32
CDC34P49427 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC34P49427 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.04□□□□□ -0.32
CDC34P49427 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.04□□□□□ -0.32
CDC34P49427 AD001527.2-201ENST00000622994 785 ntBASIC13.04□□□□□ -0.32
CDC34P49427 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.04□□□□□ -0.32
CDC34P49427 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms