Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 AC046158.3-201ENST00000624947 2558 ntBASIC14.66□□□□□ -0.06
CSNK1A1P48729 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 AC002056.1-201ENST00000395613 760 ntBASIC14.66□□□□□ -0.06
CSNK1A1P48729 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 KRT18P34-201ENST00000488218 1270 ntBASIC14.66□□□□□ -0.06
CSNK1A1P48729 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 AC092919.2-201ENST00000623631 1645 ntBASIC14.66□□□□□ -0.06
CSNK1A1P48729 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.65□□□□□ -0.06
CSNK1A1P48729 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 MIR574-201ENST00000385209 96 ntBASIC14.65□□□□□ -0.06
CSNK1A1P48729 AC023274.1-201ENST00000418278 595 ntBASIC14.65□□□□□ -0.06
CSNK1A1P48729 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 POLD2P1-201ENST00000511220 997 ntBASIC14.65□□□□□ -0.06
CSNK1A1P48729 AC112191.1-201ENST00000523689 701 ntBASIC14.65□□□□□ -0.06
CSNK1A1P48729 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 AC040169.1-201ENST00000565382 521 ntBASIC14.65□□□□□ -0.06
CSNK1A1P48729 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 AL161645.1-201ENST00000622716 1255 ntBASIC14.65□□□□□ -0.06
CSNK1A1P48729 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1A1P48729 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1A1P48729 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSNK1A1P48729 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.64□□□□□ -0.07
CSNK1A1P48729 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.64□□□□□ -0.07
CSNK1A1P48729 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CSNK1A1P48729 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.64□□□□□ -0.07
CSNK1A1P48729 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSNK1A1P48729 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms