Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RABIFP47224 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
RABIFP47224 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RABIFP47224 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RABIFP47224 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RABIFP47224 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RABIFP47224 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RABIFP47224 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.03■□□□□ 0.16
RABIFP47224 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RABIFP47224 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RABIFP47224 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RABIFP47224 AC106820.2-201ENST00000563775 3264 ntBASIC16.02■□□□□ 0.16
RABIFP47224 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.02■□□□□ 0.16
RABIFP47224 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.02■□□□□ 0.16
RABIFP47224 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 HLA-A-202ENST00000376806 1854 ntBASIC16.02■□□□□ 0.16
RABIFP47224 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.02■□□□□ 0.16
RABIFP47224 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.02■□□□□ 0.16
RABIFP47224 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
RABIFP47224 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.02■□□□□ 0.16
RABIFP47224 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.02■□□□□ 0.16
RABIFP47224 AC135586.1-201ENST00000539323 574 ntBASIC16.02■□□□□ 0.16
RABIFP47224 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.02■□□□□ 0.16
RABIFP47224 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RABIFP47224 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RABIFP47224 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RABIFP47224 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RABIFP47224 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RABIFP47224 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RABIFP47224 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RABIFP47224 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.01■□□□□ 0.15
RABIFP47224 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RABIFP47224 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
RABIFP47224 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RABIFP47224 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.01■□□□□ 0.15
RABIFP47224 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
RABIFP47224 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.01■□□□□ 0.15
RABIFP47224 POU5F1P6-201ENST00000466990 990 ntBASIC16.01■□□□□ 0.15
RABIFP47224 AL512361.1-201ENST00000554200 418 ntBASIC16.01■□□□□ 0.15
RABIFP47224 AC010336.2-201ENST00000564226 506 ntBASIC16.01■□□□□ 0.15
RABIFP47224 MIR4321-201ENST00000592276 80 ntBASIC16.01■□□□□ 0.15
RABIFP47224 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.01■□□□□ 0.15
RABIFP47224 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.01■□□□□ 0.15
RABIFP47224 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.01■□□□□ 0.15
RABIFP47224 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.01■□□□□ 0.15
RABIFP47224 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.01■□□□□ 0.15
RABIFP47224 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 AC004840.1-201ENST00000636359 365 ntBASIC16.01■□□□□ 0.15
RABIFP47224 AL033527.5-202ENST00000641632 1098 ntBASIC16.01■□□□□ 0.15
RABIFP47224 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.01■□□□□ 0.15
RABIFP47224 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RABIFP47224 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RABIFP47224 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.01■□□□□ 0.15
RABIFP47224 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RABIFP47224 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RABIFP47224 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16■□□□□ 0.15
RABIFP47224 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16■□□□□ 0.15
RABIFP47224 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RABIFP47224 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RABIFP47224 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16■□□□□ 0.15
RABIFP47224 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RABIFP47224 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RABIFP47224 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RABIFP47224 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RABIFP47224 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16■□□□□ 0.15
RABIFP47224 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms