Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 LINC00982-205ENST00000420957 435 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.16□□□□□ -0.62
CXCL5P42830 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.16□□□□□ -0.62
CXCL5P42830 AC096582.2-201ENST00000510860 516 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 NTF6B-201ENST00000591913 560 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 AC010331.1-201ENST00000611423 582 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 AL590326.2-201ENST00000625139 305 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.16□□□□□ -0.62
CXCL5P42830 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
CXCL5P42830 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 AL596087.1-201ENST00000400979 1969 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CXCL5P42830 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.16□□□□□ -0.62
CXCL5P42830 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.16□□□□□ -0.62
CXCL5P42830 TOP3BP1-201ENST00000420768 1380 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 AC243591.1-201ENST00000452967 1364 ntBASIC11.16□□□□□ -0.62
CXCL5P42830 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CXCL5P42830 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.15□□□□□ -0.62
CXCL5P42830 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 AC006449.6-201ENST00000612330 2296 ntBASIC11.15□□□□□ -0.62
CXCL5P42830 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.15□□□□□ -0.62
CXCL5P42830 AC067750.1-201ENST00000608826 6545 ntBASIC11.15□□□□□ -0.62
CXCL5P42830 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CXCL5P42830 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
CXCL5P42830 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
CXCL5P42830 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
CXCL5P42830 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.15□□□□□ -0.62
CXCL5P42830 KRT18P57-201ENST00000443599 1254 ntBASIC11.15□□□□□ -0.62
CXCL5P42830 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CXCL5P42830 AC093827.2-201ENST00000512654 315 ntBASIC11.15□□□□□ -0.62
CXCL5P42830 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.15□□□□□ -0.62
CXCL5P42830 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.15□□□□□ -0.62
CXCL5P42830 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.15□□□□□ -0.62
CXCL5P42830 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.15□□□□□ -0.62
CXCL5P42830 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.15□□□□□ -0.62
CXCL5P42830 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.15□□□□□ -0.62
CXCL5P42830 TERC-201ENST00000602385 541 ntBASIC11.15□□□□□ -0.62
CXCL5P42830 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms