Protein–RNA interactions for Protein: P32248

CCR7, C-C chemokine receptor type 7, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7P32248 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.1■□□□□ 0.17
CCR7P32248 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.1■□□□□ 0.17
CCR7P32248 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.1■□□□□ 0.17
CCR7P32248 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.1■□□□□ 0.17
CCR7P32248 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCR7P32248 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.1■□□□□ 0.17
CCR7P32248 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCR7P32248 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.1■□□□□ 0.17
CCR7P32248 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 TNRC18P3-201ENST00000441896 2691 ntBASIC16.1■□□□□ 0.17
CCR7P32248 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCR7P32248 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCR7P32248 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR7P32248 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.09■□□□□ 0.17
CCR7P32248 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR7P32248 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.09■□□□□ 0.17
CCR7P32248 AC105233.2-201ENST00000523697 349 ntBASIC16.09■□□□□ 0.17
CCR7P32248 AF228730.5-201ENST00000530288 346 ntBASIC16.09■□□□□ 0.17
CCR7P32248 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.09■□□□□ 0.17
CCR7P32248 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.09■□□□□ 0.17
CCR7P32248 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR7P32248 AC022145.2-201ENST00000598203 171 ntBASIC16.09■□□□□ 0.17
CCR7P32248 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCR7P32248 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CCR7P32248 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 AL391005.1-201ENST00000623953 2435 ntBASIC16.09■□□□□ 0.17
CCR7P32248 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR7P32248 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR7P32248 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.09■□□□□ 0.17
CCR7P32248 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCR7P32248 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCR7P32248 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR7P32248 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.08■□□□□ 0.17
CCR7P32248 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCR7P32248 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.08■□□□□ 0.17
CCR7P32248 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.08■□□□□ 0.17
CCR7P32248 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCR7P32248 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CCR7P32248 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCR7P32248 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCR7P32248 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 MIR346-201ENST00000362234 95 ntBASIC16.08■□□□□ 0.16
CCR7P32248 KRT18P13-201ENST00000400056 1290 ntBASIC16.08■□□□□ 0.16
CCR7P32248 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.08■□□□□ 0.16
CCR7P32248 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.08■□□□□ 0.16
CCR7P32248 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.08■□□□□ 0.16
CCR7P32248 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.08■□□□□ 0.16
CCR7P32248 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.08■□□□□ 0.16
CCR7P32248 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.08■□□□□ 0.16
CCR7P32248 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
CCR7P32248 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.08■□□□□ 0.16
CCR7P32248 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.08■□□□□ 0.16
CCR7P32248 AC055717.3-201ENST00000622967 595 ntBASIC16.08■□□□□ 0.16
CCR7P32248 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.08■□□□□ 0.16
CCR7P32248 AL513210.1-201ENST00000629608 234 ntBASIC16.08■□□□□ 0.16
CCR7P32248 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.08■□□□□ 0.16
CCR7P32248 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCR7P32248 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.08■□□□□ 0.16
CCR7P32248 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.08■□□□□ 0.16
CCR7P32248 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.08■□□□□ 0.16
CCR7P32248 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.08■□□□□ 0.16
CCR7P32248 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR7P32248 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.08■□□□□ 0.16
CCR7P32248 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR7P32248 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR7P32248 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms