Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PTPN6P29350 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN6P29350 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PTPN6P29350 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PTPN6P29350 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.63■□□□□ 0.09
PTPN6P29350 HCG4-201ENST00000418983 998 ntBASIC15.63■□□□□ 0.09
PTPN6P29350 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.63■□□□□ 0.09
PTPN6P29350 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN6P29350 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.63■□□□□ 0.09
PTPN6P29350 AC027601.4-201ENST00000611259 610 ntBASIC15.63■□□□□ 0.09
PTPN6P29350 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 AC129492.6-201ENST00000611383 1305 ntBASIC15.63■□□□□ 0.09
PTPN6P29350 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN6P29350 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.63■□□□□ 0.09
PTPN6P29350 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN6P29350 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN6P29350 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN6P29350 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PTPN6P29350 AP005117.1-202ENST00000581724 1908 ntBASIC15.62■□□□□ 0.09
PTPN6P29350 LINC02447-202ENST00000501888 2146 ntBASIC15.62■□□□□ 0.09
PTPN6P29350 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.62■□□□□ 0.09
PTPN6P29350 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 AC140113.2-201ENST00000604370 208 ntBASIC15.62■□□□□ 0.09
PTPN6P29350 GGTLC5P-201ENST00000617623 998 ntBASIC15.62■□□□□ 0.09
PTPN6P29350 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PTPN6P29350 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.62■□□□□ 0.09
PTPN6P29350 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PTPN6P29350 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.62■□□□□ 0.09
PTPN6P29350 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN6P29350 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 AC104640.1-201ENST00000562617 2109 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 AC069224.1-201ENST00000566372 1715 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 MED15P5-201ENST00000423150 992 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.61■□□□□ 0.09
PTPN6P29350 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.61■□□□□ 0.09
PTPN6P29350 AL591424.1-201ENST00000442569 1213 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 POLD2P1-201ENST00000511220 997 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.61■□□□□ 0.09
PTPN6P29350 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
PTPN6P29350 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.61■□□□□ 0.09
PTPN6P29350 FAM197Y3-203ENST00000618346 717 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 AC004790.2-201ENST00000623588 572 ntBASIC15.61■□□□□ 0.09
PTPN6P29350 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
PTPN6P29350 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms