Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.965e-26■■□□□ 13.1
RPS3P23396 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.015e-26■■□□□ 13.1
RPS3P23396 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.378e-11■■□□□ 13.1
RPS3P23396 RPS9-209ENST00000448962 2384 ntTSL 215.18■□□□□ 0.028e-11■■□□□ 13.1
RPS3P23396 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.17■□□□□ 0.028e-11■■□□□ 13.1
RPS3P23396 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.238e-11■■□□□ 13.1
RPS3P23396 RPS9-206ENST00000436445 752 ntTSL 213.6□□□□□ -0.238e-11■■□□□ 13.1
RPS3P23396 RPS9-208ENST00000445961 944 ntTSL 513.6□□□□□ -0.238e-11■■□□□ 13.1
RPS3P23396 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC13.33□□□□□ -0.288e-11■■□□□ 13.1
RPS3P23396 RPS9-212ENST00000495002 956 ntTSL 1 (best)12.65□□□□□ -0.388e-11■■□□□ 13.1
RPS3P23396 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.76■□□□□ 0.435e-8■■□□□ 13.1
RPS3P23396 OS9-214ENST00000550438 635 ntTSL 29.4□□□□□ -0.91e-9■■□□□ 13.1
RPS3P23396 ETNK1-206ENST00000545979 617 ntTSL 317.03■□□□□ 0.321e-9■■□□□ 13.1
RPS3P23396 ETNK1-203ENST00000538218 1659 ntTSL 1 (best)16.15■□□□□ 0.181e-9■■□□□ 13.1
RPS3P23396 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.73■□□□□ 0.111e-9■■□□□ 13.1
RPS3P23396 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.561e-9■■□□□ 13.1
RPS3P23396 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.734e-25■■□□□ 13.1
RPS3P23396 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.534e-25■■□□□ 13.1
RPS3P23396 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.244e-25■■□□□ 13.1
RPS3P23396 ACTG1-215ENST00000576917 1958 ntTSL 513.69□□□□□ -0.224e-25■■□□□ 13.1
RPS3P23396 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.234e-25■■□□□ 13.1
RPS3P23396 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.454e-25■■□□□ 13.1
RPS3P23396 ACTG1-214ENST00000576544 1720 ntTSL 512.15□□□□□ -0.464e-25■■□□□ 13.1
RPS3P23396 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.59□□□□□ -1.511e-20■■□□□ 13.1
RPS3P23396 TOMM7-205ENST00000483581 551 ntTSL 1 (best)1.57□□□□□ -2.161e-20■■□□□ 13.1
RPS3P23396 FGFR4-216ENST00000514472 552 ntTSL 421.34■■□□□ 1.011e-25■■□□□ 13.1
RPS3P23396 FGFR4-214ENST00000513166 594 ntTSL 420.94■□□□□ 0.941e-25■■□□□ 13.1
RPS3P23396 FGFR4-212ENST00000510911 709 ntTSL 420.31■□□□□ 0.841e-25■■□□□ 13.1
RPS3P23396 FGFR4-209ENST00000507708 476 ntTSL 320.25■□□□□ 0.831e-25■■□□□ 13.1
RPS3P23396 FGFR4-204ENST00000426612 712 ntTSL 1 (best)20.13■□□□□ 0.811e-25■■□□□ 13.1
RPS3P23396 FGFR4-208ENST00000503708 770 ntTSL 417.91■□□□□ 0.461e-25■■□□□ 13.1
RPS3P23396 FGFR4-205ENST00000430285 713 ntTSL 1 (best)16.36■□□□□ 0.211e-25■■□□□ 13.1
RPS3P23396 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.344e-7■■□□□ 13.1
RPS3P23396 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.233e-8■■□□□ 13.1
RPS3P23396 OS9-211ENST00000549897 700 ntTSL 214.37□□□□□ -0.119e-8■■□□□ 13.1
RPS3P23396 COMT-210ENST00000467943 546 ntTSL 223.56■■□□□ 1.362e-13■■□□□ 13.1
RPS3P23396 STIP1-208ENST00000540501 880 ntTSL 325.42■■□□□ 1.662e-7■■□□□ 13.1
RPS3P23396 EEF1D-235ENST00000530848 688 ntTSL 318.71■□□□□ 0.595e-7■■□□□ 13.1
RPS3P23396 PFAS-204ENST00000580251 559 ntTSL 317.55■□□□□ 0.41e-13■■□□□ 13.1
RPS3P23396 PFAS-203ENST00000578979 765 ntTSL 216.57■□□□□ 0.241e-13■■□□□ 13.1
RPS3P23396 PFAS-202ENST00000546020 2652 ntTSL 215.77■□□□□ 0.121e-13■■□□□ 13.1
RPS3P23396 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.448e-10■■□□□ 13.1
RPS3P23396 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.4□□□□□ -1.387e-12■■□□□ 13.1
RPS3P23396 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.44□□□□□ -1.547e-12■■□□□ 13.1
RPS3P23396 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.58□□□□□ -0.397e-7■■□□□ 13.1
RPS3P23396 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.235e-7■■□□□ 13.1
RPS3P23396 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.045e-7■■□□□ 13.1
RPS3P23396 RPS5-203ENST00000596314 718 ntTSL 515.02■□□□□ -05e-7■■□□□ 13.1
RPS3P23396 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.225e-7■■□□□ 13.1
RPS3P23396 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.68□□□□□ -0.385e-7■■□□□ 13.1
RPS3P23396 RPS5-205ENST00000598495 800 ntTSL 3 BASIC12.32□□□□□ -0.445e-7■■□□□ 13.1
RPS3P23396 CKAP5-204ENST00000525896 832 ntTSL 27.92□□□□□ -1.146e-7■■□□□ 13.1
RPS3P23396 CKAP5-212ENST00000533413 3084 ntTSL 1 (best)5.04□□□□□ -1.66e-7■■□□□ 13.1
RPS3P23396 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.85■□□□□ 0.772e-6■■□□□ 13.1
RPS3P23396 GPX4-205ENST00000587932 274 ntTSL 227.49■■□□□ 1.994e-6■■□□□ 13.1
RPS3P23396 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.874e-6■■□□□ 13.1
RPS3P23396 GPX4-202ENST00000585362 859 ntTSL 225.49■■□□□ 1.674e-6■■□□□ 13.1
RPS3P23396 ASPHD1-205ENST00000566693 1732 ntTSL 1 (best)24.3■■□□□ 1.484e-6■■□□□ 13.1
RPS3P23396 ASPHD1-202ENST00000414952 1451 ntTSL 223.53■■□□□ 1.364e-6■■□□□ 13.1
RPS3P23396 CDS2-204ENST00000467923 783 ntTSL 322.77■■□□□ 1.244e-6■■□□□ 13.1
RPS3P23396 GPX4-211ENST00000614791 431 ntTSL 322.67■■□□□ 1.224e-6■■□□□ 13.1
RPS3P23396 CDS2-202ENST00000450570 945 ntTSL 322.21■■□□□ 1.154e-6■■□□□ 13.1
RPS3P23396 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.1■■□□□ 1.134e-6■■□□□ 13.1
RPS3P23396 GPX4-208ENST00000592940 1184 ntTSL 521.86■■□□□ 1.094e-6■■□□□ 13.1
RPS3P23396 JTB-206ENST00000471173 754 ntTSL 321.06■□□□□ 0.964e-6■■□□□ 13.1
RPS3P23396 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.94■□□□□ 0.944e-6■■□□□ 13.1
RPS3P23396 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.754e-6■■□□□ 13.1
RPS3P23396 DRAM1-206ENST00000551403 920 ntTSL 519.57■□□□□ 0.724e-6■■□□□ 13.1
RPS3P23396 ASPHD1-204ENST00000563177 775 ntAPPRIS ALT2 TSL 519.44■□□□□ 0.74e-6■■□□□ 13.1
RPS3P23396 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.694e-6■■□□□ 13.1
RPS3P23396 TINAGL1-207ENST00000478398 765 ntTSL 319.22■□□□□ 0.674e-6■■□□□ 13.1
RPS3P23396 DDI2-205ENST00000546927 592 ntTSL 219.17■□□□□ 0.664e-6■■□□□ 13.1
RPS3P23396 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.64e-6■■□□□ 13.1
RPS3P23396 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.594e-6■■□□□ 13.1
RPS3P23396 COL9A2-206ENST00000466267 835 ntTSL 518.56■□□□□ 0.564e-6■■□□□ 13.1
RPS3P23396 TINAGL1-205ENST00000466998 680 ntTSL 218.17■□□□□ 0.54e-6■■□□□ 13.1
RPS3P23396 TINAGL1-203ENST00000461030 820 ntTSL 517.98■□□□□ 0.474e-6■■□□□ 13.1
RPS3P23396 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.324e-6■■□□□ 13.1
RPS3P23396 CERS4-211ENST00000560412 568 ntTSL 416.77■□□□□ 0.288e-13■■□□□ 13.1
RPS3P23396 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.71■□□□□ 0.114e-6■■□□□ 13.1
RPS3P23396 ACTN1-209ENST00000553659 434 ntTSL 415.54■□□□□ 0.084e-6■■□□□ 13.1
RPS3P23396 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.084e-6■■□□□ 13.1
RPS3P23396 TINAGL1-209ENST00000481165 4759 ntTSL 215.35■□□□□ 0.054e-6■■□□□ 13.1
RPS3P23396 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.034e-6■■□□□ 13.1
RPS3P23396 TMEM9-206ENST00000435310 507 ntTSL 215.12■□□□□ 0.014e-6■■□□□ 13.1
RPS3P23396 ABCB6-210ENST00000492953 570 ntTSL 415.03■□□□□ -04e-6■■□□□ 13.1
RPS3P23396 CLSTN1-205ENST00000477264 2169 ntTSL 214.64□□□□□ -0.078e-13■■□□□ 13.1
RPS3P23396 CES2-206ENST00000564420 862 ntTSL 314.61□□□□□ -0.074e-6■■□□□ 13.1
RPS3P23396 JTB-205ENST00000461365 542 ntTSL 514.54□□□□□ -0.084e-6■■□□□ 13.1
RPS3P23396 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.084e-6■■□□□ 13.1
RPS3P23396 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.134e-6■■□□□ 13.1
RPS3P23396 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.22□□□□□ -0.134e-6■■□□□ 13.1
RPS3P23396 AC012254.2-201ENST00000602459 1443 ntAPPRIS ALT2 TSL 514.2□□□□□ -0.144e-6■■□□□ 13.1
RPS3P23396 IQGAP1-212ENST00000560418 559 ntTSL 514.19□□□□□ -0.144e-6■■□□□ 13.1
RPS3P23396 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.18□□□□□ -0.144e-6■■□□□ 13.1
RPS3P23396 CRELD1-205ENST00000435417 966 ntTSL 514.08□□□□□ -0.164e-6■■□□□ 13.1
RPS3P23396 DOCK6-214ENST00000592403 459 ntTSL 314□□□□□ -0.174e-6■■□□□ 13.1
RPS3P23396 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.184e-6■■□□□ 13.1
RPS3P23396 DDI2-204ENST00000486680 1501 ntTSL 1 (best)13.9□□□□□ -0.194e-6■■□□□ 13.1
RPS3P23396 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.24e-6■■□□□ 13.1
Retrieved 100 of 24,271 protein–RNA pairs in 216.8 ms