Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRKCAP17252 ZNF259P1-201ENST00000407656 1365 ntBASIC15.3■□□□□ 0.04
PRKCAP17252 IGLL3P-201ENST00000412472 434 ntBASIC15.3■□□□□ 0.04
PRKCAP17252 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRKCAP17252 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.3■□□□□ 0.04
PRKCAP17252 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 HCG4B-203ENST00000450128 991 ntBASIC15.3■□□□□ 0.04
PRKCAP17252 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 SLC22A20-204ENST00000530038 1673 ntBASIC15.3■□□□□ 0.04
PRKCAP17252 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.3■□□□□ 0.04
PRKCAP17252 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
PRKCAP17252 AC013467.2-201ENST00000605472 835 ntBASIC15.3■□□□□ 0.04
PRKCAP17252 ACTL9-202ENST00000612068 1252 ntBASIC15.3■□□□□ 0.04
PRKCAP17252 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.3■□□□□ 0.04
PRKCAP17252 AC006277.1-201ENST00000624348 1610 ntBASIC15.3■□□□□ 0.04
PRKCAP17252 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PRKCAP17252 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.3■□□□□ 0.04
PRKCAP17252 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRKCAP17252 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRKCAP17252 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
PRKCAP17252 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 AC131009.4-201ENST00000624048 1740 ntBASIC15.29■□□□□ 0.04
PRKCAP17252 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRKCAP17252 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.29■□□□□ 0.04
PRKCAP17252 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRKCAP17252 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRKCAP17252 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.29■□□□□ 0.04
PRKCAP17252 PMS2P1-201ENST00000431037 1228 ntBASIC15.29■□□□□ 0.04
PRKCAP17252 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.29■□□□□ 0.04
PRKCAP17252 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.29■□□□□ 0.04
PRKCAP17252 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.29■□□□□ 0.04
PRKCAP17252 AC106730.1-201ENST00000566722 1090 ntBASIC15.29■□□□□ 0.04
PRKCAP17252 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.29■□□□□ 0.04
PRKCAP17252 MIR4492-201ENST00000581627 80 ntBASIC15.29■□□□□ 0.04
PRKCAP17252 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.29■□□□□ 0.04
PRKCAP17252 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRKCAP17252 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRKCAP17252 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRKCAP17252 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
PRKCAP17252 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRKCAP17252 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.28■□□□□ 0.04
PRKCAP17252 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.28■□□□□ 0.04
PRKCAP17252 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.28■□□□□ 0.04
PRKCAP17252 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.28■□□□□ 0.04
PRKCAP17252 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.28■□□□□ 0.04
PRKCAP17252 AC079328.2-201ENST00000561241 3354 ntBASIC15.28■□□□□ 0.04
PRKCAP17252 AC144831.1-201ENST00000573312 2656 ntBASIC15.28■□□□□ 0.04
PRKCAP17252 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRKCAP17252 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRKCAP17252 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.28■□□□□ 0.04
PRKCAP17252 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.28■□□□□ 0.04
PRKCAP17252 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.28■□□□□ 0.04
PRKCAP17252 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms