Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
UBL4AP11441 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.28■□□□□ 0.04
UBL4AP11441 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.27■□□□□ 0.04
UBL4AP11441 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 FER1L4-210ENST00000615531 5998 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.27■□□□□ 0.04
UBL4AP11441 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
UBL4AP11441 ALOX12P2-203ENST00000570921 1945 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 CICP4-201ENST00000447359 2812 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
UBL4AP11441 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.27■□□□□ 0.04
UBL4AP11441 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.27■□□□□ 0.04
UBL4AP11441 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 GGT4P-201ENST00000623672 1708 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
UBL4AP11441 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 AC007967.2-201ENST00000432613 625 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 RHOQP3-201ENST00000437982 621 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.27■□□□□ 0.04
UBL4AP11441 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBL4AP11441 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.27■□□□□ 0.04
UBL4AP11441 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.27■□□□□ 0.04
UBL4AP11441 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.27■□□□□ 0.04
UBL4AP11441 AC023141.13-201ENST00000604991 943 ntBASIC15.27■□□□□ 0.04
UBL4AP11441 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.27■□□□□ 0.04
UBL4AP11441 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.27■□□□□ 0.03
UBL4AP11441 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.27■□□□□ 0.03
UBL4AP11441 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBL4AP11441 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UBL4AP11441 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.26■□□□□ 0.03
UBL4AP11441 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
UBL4AP11441 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.26■□□□□ 0.03
UBL4AP11441 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
UBL4AP11441 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.26■□□□□ 0.03
UBL4AP11441 HMGA1P7-201ENST00000406908 502 ntBASIC15.26■□□□□ 0.03
UBL4AP11441 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
UBL4AP11441 SLC25A1P1-201ENST00000528351 927 ntBASIC15.26■□□□□ 0.03
UBL4AP11441 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
UBL4AP11441 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
UBL4AP11441 AL031055.1-201ENST00000606362 631 ntBASIC15.26■□□□□ 0.03
UBL4AP11441 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBL4AP11441 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBL4AP11441 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms