Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PCDH8P1-201ENST00000428983 2773 ntBASIC19.31■□□□□ 0.68
TOP1P11387 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TOP1P11387 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TOP1P11387 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TOP1P11387 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.31■□□□□ 0.68
TOP1P11387 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.31■□□□□ 0.68
TOP1P11387 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.31■□□□□ 0.68
TOP1P11387 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 RFPL4AP1-201ENST00000530883 850 ntBASIC19.31■□□□□ 0.68
TOP1P11387 AL512356.2-201ENST00000546955 174 ntBASIC19.31■□□□□ 0.68
TOP1P11387 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.31■□□□□ 0.68
TOP1P11387 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TOP1P11387 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TOP1P11387 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.31■□□□□ 0.68
TOP1P11387 HLA-A-202ENST00000376806 1854 ntBASIC19.31■□□□□ 0.68
TOP1P11387 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.3■□□□□ 0.68
TOP1P11387 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TOP1P11387 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TOP1P11387 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP1P11387 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TOP1P11387 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.3■□□□□ 0.68
TOP1P11387 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.3■□□□□ 0.68
TOP1P11387 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.3■□□□□ 0.68
TOP1P11387 AC026150.2-201ENST00000564693 1156 ntBASIC19.3■□□□□ 0.68
TOP1P11387 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.3■□□□□ 0.68
TOP1P11387 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.3■□□□□ 0.68
TOP1P11387 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.3■□□□□ 0.68
TOP1P11387 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.3■□□□□ 0.68
TOP1P11387 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TOP1P11387 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TOP1P11387 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 FOXO1B-201ENST00000504678 1527 ntBASIC19.3■□□□□ 0.68
TOP1P11387 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP1P11387 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.3■□□□□ 0.68
TOP1P11387 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TOP1P11387 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TOP1P11387 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOP1P11387 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
TOP1P11387 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TOP1P11387 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.29■□□□□ 0.68
TOP1P11387 SPDYE14P-201ENST00000442619 822 ntBASIC19.29■□□□□ 0.68
TOP1P11387 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.29■□□□□ 0.68
TOP1P11387 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.29■□□□□ 0.68
TOP1P11387 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.29■□□□□ 0.68
TOP1P11387 ALG1L8P-201ENST00000533887 760 ntBASIC19.29■□□□□ 0.68
TOP1P11387 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.29■□□□□ 0.68
TOP1P11387 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
TOP1P11387 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
TOP1P11387 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOP1P11387 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
TOP1P11387 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TOP1P11387 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
TOP1P11387 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP1P11387 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms