Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AC004890.2-204ENST00000481968 304 ntBASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 LINC02560-201ENST00000596379 459 ntBASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AL590560.3-201ENST00000623350 461 ntBASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AC008761.3-201ENST00000624803 892 ntBASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 SNX33P1-201ENST00000592116 1762 ntBASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40ALP0C0E4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 AL671710.1-201ENST00000610245 2349 ntBASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 AC100757.3-201ENST00000622361 1406 ntBASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40ALP0C0E4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms