Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RETP07949 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.56■□□□□ 0.24
RETP07949 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
RETP07949 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.56■□□□□ 0.24
RETP07949 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.56■□□□□ 0.24
RETP07949 AC022210.1-201ENST00000449856 793 ntBASIC16.56■□□□□ 0.24
RETP07949 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.56■□□□□ 0.24
RETP07949 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RETP07949 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RETP07949 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RETP07949 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.56■□□□□ 0.24
RETP07949 TEX28P1-201ENST00000613479 1221 ntBASIC16.56■□□□□ 0.24
RETP07949 TEX28P2-201ENST00000617764 1221 ntBASIC16.56■□□□□ 0.24
RETP07949 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.56■□□□□ 0.24
RETP07949 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RETP07949 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.56■□□□□ 0.24
RETP07949 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RETP07949 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RETP07949 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RETP07949 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.56■□□□□ 0.24
RETP07949 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RETP07949 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RETP07949 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.55■□□□□ 0.24
RETP07949 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
RETP07949 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RETP07949 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.55■□□□□ 0.24
RETP07949 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.55■□□□□ 0.24
RETP07949 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.55■□□□□ 0.24
RETP07949 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RETP07949 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RETP07949 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.55■□□□□ 0.24
RETP07949 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RETP07949 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 AL844908.2-201ENST00000609461 460 ntBASIC16.55■□□□□ 0.24
RETP07949 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RETP07949 CETN4P-206ENST00000642099 2168 ntBASIC16.55■□□□□ 0.24
RETP07949 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.55■□□□□ 0.24
RETP07949 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RETP07949 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RETP07949 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RETP07949 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RETP07949 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.54■□□□□ 0.24
RETP07949 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
RETP07949 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RETP07949 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.54■□□□□ 0.24
RETP07949 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.54■□□□□ 0.24
RETP07949 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.54■□□□□ 0.24
RETP07949 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RETP07949 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 PCDHB19P-201ENST00000570871 2371 ntBASIC16.54■□□□□ 0.24
RETP07949 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RETP07949 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RETP07949 AL353705.2-201ENST00000428243 662 ntBASIC16.54■□□□□ 0.24
RETP07949 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.54■□□□□ 0.24
RETP07949 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.54■□□□□ 0.24
RETP07949 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.54■□□□□ 0.24
RETP07949 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.54■□□□□ 0.24
RETP07949 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.54■□□□□ 0.24
RETP07949 AP001350.2-201ENST00000625104 1094 ntBASIC16.54■□□□□ 0.24
RETP07949 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.54■□□□□ 0.24
RETP07949 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RETP07949 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RETP07949 BTBD7P1-201ENST00000447253 1453 ntBASIC16.54■□□□□ 0.24
RETP07949 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RETP07949 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.54■□□□□ 0.24
RETP07949 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RETP07949 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RETP07949 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms