Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.14■□□□□ 0.65
MYCNP04198 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 RNFT1P2-201ENST00000443064 757 ntBASIC19.14■□□□□ 0.65
MYCNP04198 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.14■□□□□ 0.65
MYCNP04198 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 AC243972.2-201ENST00000541653 991 ntBASIC19.14■□□□□ 0.65
MYCNP04198 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC19.14■□□□□ 0.65
MYCNP04198 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
MYCNP04198 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 PRORSD1P-202ENST00000563365 2154 ntBASIC19.14■□□□□ 0.65
MYCNP04198 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
MYCNP04198 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.14■□□□□ 0.65
MYCNP04198 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MYCNP04198 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
MYCNP04198 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.13■□□□□ 0.65
MYCNP04198 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.13■□□□□ 0.65
MYCNP04198 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
MYCNP04198 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.13■□□□□ 0.65
MYCNP04198 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.13■□□□□ 0.65
MYCNP04198 MIR661-201ENST00000384842 89 ntBASIC19.13■□□□□ 0.65
MYCNP04198 RNU6-233P-201ENST00000410845 141 ntBASIC19.13■□□□□ 0.65
MYCNP04198 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.13■□□□□ 0.65
MYCNP04198 UBE2V2P3-201ENST00000433562 437 ntBASIC19.13■□□□□ 0.65
MYCNP04198 HLA-J-202ENST00000469281 1241 ntBASIC19.13■□□□□ 0.65
MYCNP04198 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC19.13■□□□□ 0.65
MYCNP04198 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.13■□□□□ 0.65
MYCNP04198 CD69-203ENST00000536709 1020 ntTSL 2 BASIC19.13■□□□□ 0.65
MYCNP04198 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.13■□□□□ 0.65
MYCNP04198 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 AL109659.3-201ENST00000624985 950 ntBASIC19.13■□□□□ 0.65
MYCNP04198 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
MYCNP04198 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.13■□□□□ 0.65
MYCNP04198 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
MYCNP04198 AC008677.1-201ENST00000519230 1561 ntBASIC19.13■□□□□ 0.65
MYCNP04198 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.13■□□□□ 0.65
MYCNP04198 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.13■□□□□ 0.65
MYCNP04198 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MYCNP04198 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.13■□□□□ 0.65
MYCNP04198 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MYCNP04198 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.12■□□□□ 0.65
MYCNP04198 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.12■□□□□ 0.65
MYCNP04198 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.12■□□□□ 0.65
MYCNP04198 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.12■□□□□ 0.65
MYCNP04198 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.12■□□□□ 0.65
MYCNP04198 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.12■□□□□ 0.65
MYCNP04198 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC19.12■□□□□ 0.65
MYCNP04198 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.12■□□□□ 0.65
MYCNP04198 SPCS2P4-201ENST00000436160 681 ntBASIC19.12■□□□□ 0.65
MYCNP04198 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.12■□□□□ 0.65
MYCNP04198 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC19.12■□□□□ 0.65
MYCNP04198 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.12■□□□□ 0.65
MYCNP04198 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MYCNP04198 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC19.12■□□□□ 0.65
MYCNP04198 AC005225.4-201ENST00000557330 545 ntBASIC19.12■□□□□ 0.65
MYCNP04198 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.12■□□□□ 0.65
MYCNP04198 AC018362.1-201ENST00000564805 846 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms