Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.59■□□□□ 0.09
MT-ND1P03886 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MT-ND1P03886 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND1P03886 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-ND1P03886 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND1P03886 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-ND1P03886 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND1P03886 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
MT-ND1P03886 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
MT-ND1P03886 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.58■□□□□ 0.09
MT-ND1P03886 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
MT-ND1P03886 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.58■□□□□ 0.09
MT-ND1P03886 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 CDC14C-201ENST00000428251 1719 ntBASIC15.58■□□□□ 0.08
MT-ND1P03886 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.58■□□□□ 0.08
MT-ND1P03886 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.58■□□□□ 0.08
MT-ND1P03886 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.58■□□□□ 0.08
MT-ND1P03886 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.58■□□□□ 0.08
MT-ND1P03886 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.58■□□□□ 0.08
MT-ND1P03886 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.58■□□□□ 0.08
MT-ND1P03886 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 AL358472.4-201ENST00000633140 710 ntBASIC15.58■□□□□ 0.08
MT-ND1P03886 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
MT-ND1P03886 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 SIGLEC16-201ENST00000599858 1437 ntBASIC15.58■□□□□ 0.08
MT-ND1P03886 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.58■□□□□ 0.08
MT-ND1P03886 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
MT-ND1P03886 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.58■□□□□ 0.08
MT-ND1P03886 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.58■□□□□ 0.08
MT-ND1P03886 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MT-ND1P03886 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
MT-ND1P03886 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.57■□□□□ 0.08
MT-ND1P03886 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.57■□□□□ 0.08
MT-ND1P03886 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.57■□□□□ 0.08
MT-ND1P03886 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.57■□□□□ 0.08
MT-ND1P03886 AC112504.1-201ENST00000623415 1841 ntBASIC15.57■□□□□ 0.08
MT-ND1P03886 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MT-ND1P03886 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MT-ND1P03886 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MT-ND1P03886 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.57■□□□□ 0.08
MT-ND1P03886 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
MT-ND1P03886 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND1P03886 ATP5G2P1-201ENST00000433580 426 ntBASIC15.57■□□□□ 0.08
MT-ND1P03886 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.57■□□□□ 0.08
MT-ND1P03886 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms