Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCA1O95477 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ABCA1O95477 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCA1O95477 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 MIR346-201ENST00000362234 95 ntBASIC13.81□□□□□ -0.2
ABCA1O95477 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ABCA1O95477 DGCR5-201ENST00000399539 862 ntBASIC13.81□□□□□ -0.2
ABCA1O95477 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 SPCS2P4-201ENST00000436160 681 ntBASIC13.81□□□□□ -0.2
ABCA1O95477 U91328.1-201ENST00000437528 223 ntBASIC13.81□□□□□ -0.2
ABCA1O95477 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 AC131009.4-201ENST00000624048 1740 ntBASIC13.81□□□□□ -0.2
ABCA1O95477 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ABCA1O95477 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ABCA1O95477 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 API5-211ENST00000534695 560 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.81□□□□□ -0.2
ABCA1O95477 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.81□□□□□ -0.2
ABCA1O95477 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.81□□□□□ -0.2
ABCA1O95477 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ABCA1O95477 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ABCA1O95477 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCA1O95477 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA1O95477 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA1O95477 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA1O95477 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA1O95477 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCA1O95477 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA1O95477 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ABCA1O95477 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA1O95477 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ABCA1O95477 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCA1O95477 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ABCA1O95477 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ABCA1O95477 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA1O95477 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA1O95477 GPR53P-205ENST00000457298 1084 ntBASIC13.8□□□□□ -0.2
ABCA1O95477 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA1O95477 AC091167.2-201ENST00000579581 588 ntBASIC13.8□□□□□ -0.2
ABCA1O95477 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCA1O95477 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms