Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMC2O95347 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SMC2O95347 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMC2O95347 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMC2O95347 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.65■□□□□ 0.58
SMC2O95347 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 PCGF3-213ENST00000620529 1899 ntBASIC18.65■□□□□ 0.58
SMC2O95347 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SMC2O95347 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.65■□□□□ 0.58
SMC2O95347 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.65■□□□□ 0.58
SMC2O95347 HCG4-201ENST00000418983 998 ntBASIC18.65■□□□□ 0.58
SMC2O95347 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.65■□□□□ 0.58
SMC2O95347 POU5F1P6-201ENST00000466990 990 ntBASIC18.65■□□□□ 0.58
SMC2O95347 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.65■□□□□ 0.58
SMC2O95347 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.65■□□□□ 0.58
SMC2O95347 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMC2O95347 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SMC2O95347 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.65■□□□□ 0.58
SMC2O95347 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SMC2O95347 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMC2O95347 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMC2O95347 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMC2O95347 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMC2O95347 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SMC2O95347 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMC2O95347 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMC2O95347 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMC2O95347 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMC2O95347 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMC2O95347 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 AC006449.6-201ENST00000612330 2296 ntBASIC18.64■□□□□ 0.57
SMC2O95347 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMC2O95347 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 KRT18P27-201ENST00000427733 1299 ntBASIC18.64■□□□□ 0.57
SMC2O95347 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.64■□□□□ 0.57
SMC2O95347 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.64■□□□□ 0.57
SMC2O95347 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.64■□□□□ 0.57
SMC2O95347 AC136632.2-201ENST00000512891 861 ntBASIC18.64■□□□□ 0.57
SMC2O95347 OR7E14P-202ENST00000530490 1290 ntBASIC18.64■□□□□ 0.57
SMC2O95347 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.64■□□□□ 0.57
SMC2O95347 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.64■□□□□ 0.57
SMC2O95347 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.64■□□□□ 0.57
SMC2O95347 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMC2O95347 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.64■□□□□ 0.57
SMC2O95347 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SMC2O95347 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMC2O95347 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMC2O95347 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.63■□□□□ 0.57
SMC2O95347 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMC2O95347 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMC2O95347 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms