Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 AC016027.1-202ENST00000607927 1699 ntBASIC13.16□□□□□ -0.3
NDUFA3O95167 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.16□□□□□ -0.3
NDUFA3O95167 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NDUFA3O95167 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.16□□□□□ -0.3
NDUFA3O95167 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA3O95167 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA3O95167 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.16□□□□□ -0.3
NDUFA3O95167 AC099522.2-201ENST00000607001 744 ntBASIC13.16□□□□□ -0.3
NDUFA3O95167 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.16□□□□□ -0.3
NDUFA3O95167 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA3O95167 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NDUFA3O95167 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA3O95167 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA3O95167 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA3O95167 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NDUFA3O95167 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.15□□□□□ -0.3
NDUFA3O95167 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
NDUFA3O95167 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.15□□□□□ -0.3
NDUFA3O95167 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.15□□□□□ -0.3
NDUFA3O95167 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 AP000347.1-202ENST00000435868 847 ntBASIC13.15□□□□□ -0.3
NDUFA3O95167 RARRES2P8-201ENST00000566335 367 ntBASIC13.15□□□□□ -0.3
NDUFA3O95167 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 AC091812.2-201ENST00000619081 385 ntBASIC13.15□□□□□ -0.3
NDUFA3O95167 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NDUFA3O95167 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA3O95167 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA3O95167 AC068587.6-202ENST00000641839 5619 ntBASIC13.15□□□□□ -0.3
NDUFA3O95167 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA3O95167 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NDUFA3O95167 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms