Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
TRIM3O75382 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
TRIM3O75382 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
TRIM3O75382 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 AC005915.1-201ENST00000624912 2018 ntBASIC15.39■□□□□ 0.05
TRIM3O75382 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM3O75382 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM3O75382 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM3O75382 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM3O75382 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 HTR5BP-201ENST00000430851 1154 ntBASIC15.39■□□□□ 0.05
TRIM3O75382 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.39■□□□□ 0.05
TRIM3O75382 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM3O75382 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM3O75382 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM3O75382 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM3O75382 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM3O75382 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM3O75382 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM3O75382 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
TRIM3O75382 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM3O75382 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRIM3O75382 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM3O75382 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM3O75382 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 HCG4-201ENST00000418983 998 ntBASIC15.38■□□□□ 0.05
TRIM3O75382 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM3O75382 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM3O75382 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM3O75382 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
TRIM3O75382 AP002472.1-201ENST00000577490 586 ntBASIC15.38■□□□□ 0.05
TRIM3O75382 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
TRIM3O75382 MPDU1-223ENST00000582151 728 ntBASIC15.38■□□□□ 0.05
TRIM3O75382 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM3O75382 AL078644.1-201ENST00000609881 752 ntBASIC15.38■□□□□ 0.05
TRIM3O75382 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM3O75382 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 AC006449.5-201ENST00000610658 2098 ntBASIC15.38■□□□□ 0.05
TRIM3O75382 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM3O75382 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 SLC22A20-204ENST00000530038 1673 ntBASIC15.38■□□□□ 0.05
TRIM3O75382 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM3O75382 AC012569.1-201ENST00000591191 1524 ntBASIC15.38■□□□□ 0.05
TRIM3O75382 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
TRIM3O75382 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM3O75382 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM3O75382 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM3O75382 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM3O75382 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms