Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HCN1O60741 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.44■□□□□ 0.06
HCN1O60741 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.44■□□□□ 0.06
HCN1O60741 AL021920.2-201ENST00000624828 1351 ntBASIC15.44■□□□□ 0.06
HCN1O60741 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.44■□□□□ 0.06
HCN1O60741 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.44■□□□□ 0.06
HCN1O60741 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HCN1O60741 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.44■□□□□ 0.06
HCN1O60741 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.43■□□□□ 0.06
HCN1O60741 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HCN1O60741 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.43■□□□□ 0.06
HCN1O60741 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.43■□□□□ 0.06
HCN1O60741 AC087163.2-201ENST00000457299 853 ntBASIC15.43■□□□□ 0.06
HCN1O60741 AC074386.1-202ENST00000463561 864 ntBASIC15.43■□□□□ 0.06
HCN1O60741 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.43■□□□□ 0.06
HCN1O60741 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.43■□□□□ 0.06
HCN1O60741 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
HCN1O60741 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.43■□□□□ 0.06
HCN1O60741 AC134684.3-201ENST00000641758 218 ntBASIC15.43■□□□□ 0.06
HCN1O60741 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 HLA-A-202ENST00000376806 1854 ntBASIC15.43■□□□□ 0.06
HCN1O60741 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HCN1O60741 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 AC025580.3-201ENST00000617932 1424 ntBASIC15.43■□□□□ 0.06
HCN1O60741 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HCN1O60741 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 AL391256.1-201ENST00000443260 1855 ntBASIC15.42■□□□□ 0.06
HCN1O60741 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 AL645728.1-201ENST00000366221 2101 ntBASIC15.42■□□□□ 0.06
HCN1O60741 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HCN1O60741 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.42■□□□□ 0.06
HCN1O60741 HTR5BP-201ENST00000430851 1154 ntBASIC15.42■□□□□ 0.06
HCN1O60741 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.42■□□□□ 0.06
HCN1O60741 AP006288.1-201ENST00000446065 395 ntBASIC15.42■□□□□ 0.06
HCN1O60741 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.42■□□□□ 0.06
HCN1O60741 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.42■□□□□ 0.06
HCN1O60741 AP001160.2-201ENST00000596071 487 ntBASIC15.42■□□□□ 0.06
HCN1O60741 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.42■□□□□ 0.06
HCN1O60741 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCN1O60741 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HCN1O60741 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.42■□□□□ 0.06
HCN1O60741 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.42■□□□□ 0.06
HCN1O60741 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCN1O60741 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HCN1O60741 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms