Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CUBNO60494 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CUBNO60494 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC12.96□□□□□ -0.33
CUBNO60494 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.96□□□□□ -0.33
CUBNO60494 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.96□□□□□ -0.33
CUBNO60494 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CUBNO60494 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CUBNO60494 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CUBNO60494 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.96□□□□□ -0.34
CUBNO60494 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.96□□□□□ -0.34
CUBNO60494 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.96□□□□□ -0.34
CUBNO60494 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CUBNO60494 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.96□□□□□ -0.34
CUBNO60494 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CUBNO60494 HINT2P1-201ENST00000419438 481 ntBASIC12.96□□□□□ -0.34
CUBNO60494 SDHAP3-202ENST00000515467 728 ntBASIC12.96□□□□□ -0.34
CUBNO60494 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
CUBNO60494 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.96□□□□□ -0.34
CUBNO60494 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CUBNO60494 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
CUBNO60494 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CUBNO60494 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CUBNO60494 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 AC093724.1-201ENST00000448659 1027 ntBASIC12.95□□□□□ -0.34
CUBNO60494 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.95□□□□□ -0.34
CUBNO60494 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.95□□□□□ -0.34
CUBNO60494 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.95□□□□□ -0.34
CUBNO60494 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CUBNO60494 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.95□□□□□ -0.34
CUBNO60494 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CUBNO60494 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 MEP1AP4-201ENST00000423244 1087 ntBASIC12.95□□□□□ -0.34
CUBNO60494 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 KRT43P-201ENST00000434019 910 ntBASIC12.95□□□□□ -0.34
CUBNO60494 AL162726.2-201ENST00000438986 1017 ntBASIC12.95□□□□□ -0.34
CUBNO60494 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.95□□□□□ -0.34
CUBNO60494 AC068587.3-201ENST00000526613 355 ntBASIC12.95□□□□□ -0.34
CUBNO60494 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.95□□□□□ -0.34
CUBNO60494 AL118558.3-201ENST00000607414 1079 ntBASIC12.95□□□□□ -0.34
CUBNO60494 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
CUBNO60494 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.95□□□□□ -0.34
CUBNO60494 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.95□□□□□ -0.34
CUBNO60494 AL138781.2-201ENST00000617896 1843 ntBASIC12.94□□□□□ -0.34
CUBNO60494 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CUBNO60494 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CUBNO60494 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CUBNO60494 AC005052.1-201ENST00000625181 2492 ntBASIC12.94□□□□□ -0.34
CUBNO60494 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CUBNO60494 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CUBNO60494 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.94□□□□□ -0.34
CUBNO60494 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CUBNO60494 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CUBNO60494 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CUBNO60494 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CUBNO60494 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CUBNO60494 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.94□□□□□ -0.34
CUBNO60494 HIST3H2BA-201ENST00000436555 524 ntBASIC12.94□□□□□ -0.34
CUBNO60494 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.94□□□□□ -0.34
CUBNO60494 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.94□□□□□ -0.34
CUBNO60494 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.94□□□□□ -0.34
CUBNO60494 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CUBNO60494 AC116353.5-201ENST00000638148 1699 ntBASIC12.94□□□□□ -0.34
CUBNO60494 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CUBNO60494 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms