Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.45■□□□□ 0.54
ACTN4O43707 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.44■□□□□ 0.54
ACTN4O43707 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ACTN4O43707 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.44■□□□□ 0.54
ACTN4O43707 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.44■□□□□ 0.54
ACTN4O43707 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.44■□□□□ 0.54
ACTN4O43707 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.44■□□□□ 0.54
ACTN4O43707 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.44■□□□□ 0.54
ACTN4O43707 AC079776.4-201ENST00000511039 504 ntBASIC18.44■□□□□ 0.54
ACTN4O43707 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ACTN4O43707 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 AL009183.1-201ENST00000603760 355 ntBASIC18.44■□□□□ 0.54
ACTN4O43707 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACTN4O43707 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ACTN4O43707 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.44■□□□□ 0.54
ACTN4O43707 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.44■□□□□ 0.54
ACTN4O43707 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ACTN4O43707 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ACTN4O43707 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.43■□□□□ 0.54
ACTN4O43707 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.43■□□□□ 0.54
ACTN4O43707 MIR648-201ENST00000385046 94 ntBASIC18.43■□□□□ 0.54
ACTN4O43707 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ACTN4O43707 AC093724.1-201ENST00000448659 1027 ntBASIC18.43■□□□□ 0.54
ACTN4O43707 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
ACTN4O43707 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.43■□□□□ 0.54
ACTN4O43707 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.43■□□□□ 0.54
ACTN4O43707 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.43■□□□□ 0.54
ACTN4O43707 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ACTN4O43707 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ACTN4O43707 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ACTN4O43707 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.43■□□□□ 0.54
ACTN4O43707 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.43■□□□□ 0.54
ACTN4O43707 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACTN4O43707 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.42■□□□□ 0.54
ACTN4O43707 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ACTN4O43707 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ACTN4O43707 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.42■□□□□ 0.54
ACTN4O43707 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.42■□□□□ 0.54
ACTN4O43707 AC034105.1-201ENST00000563488 319 ntBASIC18.42■□□□□ 0.54
ACTN4O43707 AC145285.3-201ENST00000564603 959 ntBASIC18.42■□□□□ 0.54
ACTN4O43707 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms