Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.35□□□□□ -0.11
XRCC2O43543 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.35□□□□□ -0.11
XRCC2O43543 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.35□□□□□ -0.11
XRCC2O43543 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
XRCC2O43543 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.35□□□□□ -0.11
XRCC2O43543 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
XRCC2O43543 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
XRCC2O43543 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 AL513523.2-202ENST00000427283 2040 ntBASIC14.34□□□□□ -0.11
XRCC2O43543 AC026691.1-201ENST00000602502 2017 ntBASIC14.34□□□□□ -0.11
XRCC2O43543 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.34□□□□□ -0.11
XRCC2O43543 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 IGLL3P-201ENST00000412472 434 ntBASIC14.34□□□□□ -0.11
XRCC2O43543 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.34□□□□□ -0.11
XRCC2O43543 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.34□□□□□ -0.11
XRCC2O43543 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
XRCC2O43543 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
XRCC2O43543 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
XRCC2O43543 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
XRCC2O43543 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
XRCC2O43543 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.33□□□□□ -0.11
XRCC2O43543 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
XRCC2O43543 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.33□□□□□ -0.11
XRCC2O43543 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.33□□□□□ -0.12
XRCC2O43543 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
XRCC2O43543 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
XRCC2O43543 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.33□□□□□ -0.12
XRCC2O43543 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
XRCC2O43543 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
XRCC2O43543 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.33□□□□□ -0.12
XRCC2O43543 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
XRCC2O43543 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.33□□□□□ -0.12
XRCC2O43543 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XRCC2O43543 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.33□□□□□ -0.12
XRCC2O43543 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
XRCC2O43543 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms