Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TNRC18O15417 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 LINC00304-203ENST00000565008 1864 ntBASIC17.4■□□□□ 0.38
TNRC18O15417 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNRC18O15417 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.4■□□□□ 0.38
TNRC18O15417 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.4■□□□□ 0.38
TNRC18O15417 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNRC18O15417 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNRC18O15417 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNRC18O15417 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNRC18O15417 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNRC18O15417 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.4■□□□□ 0.38
TNRC18O15417 AC116345.2-201ENST00000512837 523 ntBASIC17.4■□□□□ 0.38
TNRC18O15417 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.4■□□□□ 0.38
TNRC18O15417 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.4■□□□□ 0.38
TNRC18O15417 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.4■□□□□ 0.38
TNRC18O15417 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.4■□□□□ 0.38
TNRC18O15417 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.4■□□□□ 0.38
TNRC18O15417 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNRC18O15417 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TNRC18O15417 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TNRC18O15417 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNRC18O15417 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNRC18O15417 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNRC18O15417 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TNRC18O15417 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.39■□□□□ 0.37
TNRC18O15417 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.39■□□□□ 0.37
TNRC18O15417 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.39■□□□□ 0.37
TNRC18O15417 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNRC18O15417 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNRC18O15417 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNRC18O15417 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TNRC18O15417 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.39■□□□□ 0.37
TNRC18O15417 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.39■□□□□ 0.37
TNRC18O15417 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNRC18O15417 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.39■□□□□ 0.37
TNRC18O15417 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TNRC18O15417 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNRC18O15417 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.38■□□□□ 0.37
TNRC18O15417 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.38■□□□□ 0.37
TNRC18O15417 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.38■□□□□ 0.37
TNRC18O15417 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.38■□□□□ 0.37
TNRC18O15417 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.38■□□□□ 0.37
TNRC18O15417 AL353770.1-201ENST00000614915 403 ntBASIC17.38■□□□□ 0.37
TNRC18O15417 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNRC18O15417 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.38■□□□□ 0.37
TNRC18O15417 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNRC18O15417 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNRC18O15417 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.38■□□□□ 0.37
TNRC18O15417 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TNRC18O15417 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNRC18O15417 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNRC18O15417 JPT2-203ENST00000382711 894 ntTSL 4 BASIC17.38■□□□□ 0.37
TNRC18O15417 AP002803.1-201ENST00000528836 498 ntBASIC17.38■□□□□ 0.37
TNRC18O15417 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.38■□□□□ 0.37
TNRC18O15417 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.38■□□□□ 0.37
TNRC18O15417 PPY2P-201ENST00000582808 702 ntBASIC17.38■□□□□ 0.37
TNRC18O15417 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.38■□□□□ 0.37
TNRC18O15417 AL021920.2-201ENST00000624828 1351 ntBASIC17.38■□□□□ 0.37
TNRC18O15417 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.38■□□□□ 0.37
TNRC18O15417 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNRC18O15417 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.38■□□□□ 0.37
TNRC18O15417 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.38■□□□□ 0.37
TNRC18O15417 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.37■□□□□ 0.37
TNRC18O15417 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.37■□□□□ 0.37
TNRC18O15417 FO393414.2-201ENST00000405153 598 ntBASIC17.37■□□□□ 0.37
TNRC18O15417 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.37■□□□□ 0.37
TNRC18O15417 RNA5SP486-201ENST00000515961 83 ntBASIC17.37■□□□□ 0.37
TNRC18O15417 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.37■□□□□ 0.37
TNRC18O15417 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TNRC18O15417 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TNRC18O15417 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.37■□□□□ 0.37
TNRC18O15417 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.37■□□□□ 0.37
TNRC18O15417 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.37■□□□□ 0.37
TNRC18O15417 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.37■□□□□ 0.37
TNRC18O15417 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms