Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.74■□□□□ 0.59
ATP2A1O14983 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.74■□□□□ 0.59
ATP2A1O14983 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 AL596325.1-201ENST00000563991 1082 ntBASIC18.74■□□□□ 0.59
ATP2A1O14983 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP2A1O14983 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP2A1O14983 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP2A1O14983 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP2A1O14983 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP2A1O14983 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ATP2A1O14983 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP2A1O14983 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.73■□□□□ 0.59
ATP2A1O14983 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP2A1O14983 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ATP2A1O14983 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP2A1O14983 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 AL512361.1-201ENST00000554200 418 ntBASIC18.73■□□□□ 0.59
ATP2A1O14983 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP2A1O14983 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP2A1O14983 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP2A1O14983 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ATP2A1O14983 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ATP2A1O14983 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ATP2A1O14983 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP2A1O14983 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP2A1O14983 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ATP2A1O14983 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ATP2A1O14983 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ATP2A1O14983 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.72■□□□□ 0.59
ATP2A1O14983 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATP2A1O14983 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP2A1O14983 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ATP2A1O14983 NME2P1-201ENST00000426182 414 ntBASIC18.72■□□□□ 0.59
ATP2A1O14983 RN7SL618P-201ENST00000477850 296 ntBASIC18.72■□□□□ 0.59
ATP2A1O14983 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.72■□□□□ 0.59
ATP2A1O14983 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.72■□□□□ 0.59
ATP2A1O14983 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.72■□□□□ 0.59
ATP2A1O14983 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.72■□□□□ 0.59
ATP2A1O14983 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.72■□□□□ 0.59
ATP2A1O14983 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.72■□□□□ 0.59
ATP2A1O14983 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.72■□□□□ 0.59
ATP2A1O14983 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ATP2A1O14983 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.72■□□□□ 0.59
ATP2A1O14983 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.72■□□□□ 0.59
ATP2A1O14983 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.72■□□□□ 0.59
ATP2A1O14983 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.72■□□□□ 0.59
ATP2A1O14983 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2A1O14983 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP2A1O14983 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ATP2A1O14983 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
ATP2A1O14983 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2A1O14983 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms