Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
E2F3O00716 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.07■□□□□ 0.16
E2F3O00716 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.07■□□□□ 0.16
E2F3O00716 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.07■□□□□ 0.16
E2F3O00716 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.07■□□□□ 0.16
E2F3O00716 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.07■□□□□ 0.16
E2F3O00716 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.07■□□□□ 0.16
E2F3O00716 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.07■□□□□ 0.16
E2F3O00716 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.07■□□□□ 0.16
E2F3O00716 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
E2F3O00716 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
E2F3O00716 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 AC010491.1-201ENST00000563101 2797 ntBASIC16.06■□□□□ 0.16
E2F3O00716 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.06■□□□□ 0.16
E2F3O00716 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 IGLL3P-201ENST00000412472 434 ntBASIC16.06■□□□□ 0.16
E2F3O00716 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
E2F3O00716 RPS8P6-201ENST00000426177 609 ntBASIC16.06■□□□□ 0.16
E2F3O00716 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.06■□□□□ 0.16
E2F3O00716 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.06■□□□□ 0.16
E2F3O00716 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.06■□□□□ 0.16
E2F3O00716 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
E2F3O00716 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.06■□□□□ 0.16
E2F3O00716 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 AC002347.1-201ENST00000569543 541 ntBASIC16.06■□□□□ 0.16
E2F3O00716 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 AC134684.3-201ENST00000641758 218 ntBASIC16.06■□□□□ 0.16
E2F3O00716 AL645728.2-201ENST00000641974 660 ntBASIC16.06■□□□□ 0.16
E2F3O00716 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.06■□□□□ 0.16
E2F3O00716 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
E2F3O00716 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
E2F3O00716 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
E2F3O00716 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.05■□□□□ 0.16
E2F3O00716 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
E2F3O00716 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.05■□□□□ 0.16
E2F3O00716 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.05■□□□□ 0.16
E2F3O00716 VN2R19P-201ENST00000442399 1052 ntBASIC16.05■□□□□ 0.16
E2F3O00716 AL513480.1-201ENST00000451731 511 ntBASIC16.05■□□□□ 0.16
E2F3O00716 AL031432.2-201ENST00000566714 459 ntBASIC16.05■□□□□ 0.16
E2F3O00716 AL928711.1-201ENST00000570165 459 ntBASIC16.05■□□□□ 0.16
E2F3O00716 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.05■□□□□ 0.16
E2F3O00716 AL031055.1-201ENST00000606362 631 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms