Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXN3O00409 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXN3O00409 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXN3O00409 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FOXN3O00409 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXN3O00409 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXN3O00409 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.61■□□□□ 0.41
FOXN3O00409 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXN3O00409 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXN3O00409 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
FOXN3O00409 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXN3O00409 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
FOXN3O00409 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
FOXN3O00409 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXN3O00409 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.6■□□□□ 0.41
FOXN3O00409 AC093724.1-201ENST00000448659 1027 ntBASIC17.6■□□□□ 0.41
FOXN3O00409 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.6■□□□□ 0.41
FOXN3O00409 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
FOXN3O00409 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
FOXN3O00409 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
FOXN3O00409 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
FOXN3O00409 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
FOXN3O00409 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
FOXN3O00409 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
FOXN3O00409 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXN3O00409 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXN3O00409 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FOXN3O00409 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
FOXN3O00409 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 AC046158.3-201ENST00000624947 2558 ntBASIC17.59■□□□□ 0.41
FOXN3O00409 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 U82695.1-201ENST00000635752 1889 ntBASIC17.59■□□□□ 0.41
FOXN3O00409 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXN3O00409 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXN3O00409 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
FOXN3O00409 MED15P5-201ENST00000423150 992 ntBASIC17.59■□□□□ 0.41
FOXN3O00409 KRT18P34-201ENST00000488218 1270 ntBASIC17.59■□□□□ 0.41
FOXN3O00409 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXN3O00409 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXN3O00409 RNA5SP416-201ENST00000516838 111 ntBASIC17.59■□□□□ 0.41
FOXN3O00409 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.59■□□□□ 0.41
FOXN3O00409 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
FOXN3O00409 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXN3O00409 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.59■□□□□ 0.41
FOXN3O00409 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 FAM197Y3-203ENST00000618346 717 ntBASIC17.59■□□□□ 0.41
FOXN3O00409 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXN3O00409 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FOXN3O00409 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.59■□□□□ 0.41
FOXN3O00409 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
FOXN3O00409 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
FOXN3O00409 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
FOXN3O00409 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
FOXN3O00409 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXN3O00409 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXN3O00409 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FOXN3O00409 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXN3O00409 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.58■□□□□ 0.41
FOXN3O00409 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXN3O00409 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXN3O00409 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FOXN3O00409 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.58■□□□□ 0.41
FOXN3O00409 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXN3O00409 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXN3O00409 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXN3O00409 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXN3O00409 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXN3O00409 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXN3O00409 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXN3O00409 AL591424.1-201ENST00000442569 1213 ntBASIC17.58■□□□□ 0.4
FOXN3O00409 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
FOXN3O00409 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.58■□□□□ 0.4
FOXN3O00409 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXN3O00409 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXN3O00409 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.58■□□□□ 0.4
FOXN3O00409 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
FOXN3O00409 AC068137.2-201ENST00000605408 478 ntBASIC17.58■□□□□ 0.4
FOXN3O00409 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms