Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 RPSAP43-201ENST00000402237 625 ntBASIC17.55■□□□□ 0.4
O00370 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
O00370 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.55■□□□□ 0.4
O00370 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.55■□□□□ 0.4
O00370 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
O00370 RARRES2P8-201ENST00000566335 367 ntBASIC17.55■□□□□ 0.4
O00370 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 AC010327.4-202ENST00000591484 748 ntBASIC17.55■□□□□ 0.4
O00370 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
O00370 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.55■□□□□ 0.4
O00370 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.55■□□□□ 0.4
O00370 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
O00370 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
O00370 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.55■□□□□ 0.4
O00370 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
O00370 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.55■□□□□ 0.4
O00370 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
O00370 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.54■□□□□ 0.4
O00370 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
O00370 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.54■□□□□ 0.4
O00370 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.54■□□□□ 0.4
O00370 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.54■□□□□ 0.4
O00370 ACTG1P14-201ENST00000446382 1122 ntBASIC17.54■□□□□ 0.4
O00370 YBX1P5-201ENST00000509441 847 ntBASIC17.54■□□□□ 0.4
O00370 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.54■□□□□ 0.4
O00370 AC005829.1-201ENST00000570002 483 ntBASIC17.54■□□□□ 0.4
O00370 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
O00370 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
O00370 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.54■□□□□ 0.4
O00370 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.54■□□□□ 0.4
O00370 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.54■□□□□ 0.4
O00370 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
O00370 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
O00370 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
O00370 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
O00370 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.53■□□□□ 0.4
O00370 LINC01144-201ENST00000626198 1710 ntBASIC17.53■□□□□ 0.4
O00370 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.53■□□□□ 0.4
O00370 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.53■□□□□ 0.4
O00370 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.53■□□□□ 0.4
O00370 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
O00370 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
O00370 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.53■□□□□ 0.4
O00370 UPF3AP3-201ENST00000420996 769 ntBASIC17.53■□□□□ 0.4
O00370 AL671277.1-201ENST00000429656 993 ntBASIC17.53■□□□□ 0.4
O00370 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.53■□□□□ 0.4
O00370 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 KRT18P34-201ENST00000488218 1270 ntBASIC17.53■□□□□ 0.4
O00370 AC112482.1-201ENST00000492080 688 ntBASIC17.53■□□□□ 0.4
O00370 AC092865.5-201ENST00000545435 363 ntBASIC17.53■□□□□ 0.4
O00370 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.53■□□□□ 0.4
O00370 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
O00370 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.53■□□□□ 0.4
O00370 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
O00370 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.53■□□□□ 0.4
O00370 ELL2P1-201ENST00000413990 1906 ntBASIC17.53■□□□□ 0.4
O00370 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
O00370 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.53■□□□□ 0.4
O00370 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.52■□□□□ 0.4
O00370 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
O00370 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms