Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC28A1O00337 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A1O00337 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC28A1O00337 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A1O00337 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 PRSS29P-201ENST00000440800 595 ntBASIC15.86■□□□□ 0.13
SLC28A1O00337 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A1O00337 EMBP1-201ENST00000458200 901 ntBASIC15.86■□□□□ 0.13
SLC28A1O00337 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 CXCL1P1-201ENST00000502804 216 ntBASIC15.86■□□□□ 0.13
SLC28A1O00337 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SLC28A1O00337 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC28A1O00337 AC010491.1-201ENST00000563101 2797 ntBASIC15.86■□□□□ 0.13
SLC28A1O00337 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A1O00337 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 CDC14C-201ENST00000428251 1719 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC28A1O00337 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.85■□□□□ 0.13
SLC28A1O00337 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SLC28A1O00337 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A1O00337 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A1O00337 RNU1-129P-201ENST00000384064 167 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 HMGA1P7-201ENST00000406908 502 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 PMS2P4-201ENST00000412466 1052 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A1O00337 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A1O00337 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC28A1O00337 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 MIR3909-201ENST00000579518 119 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 U1.21-201ENST00000580816 167 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A1O00337 AL031055.1-201ENST00000606362 631 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SLC28A1O00337 AL645728.2-201ENST00000641974 660 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A1O00337 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 PAUPAR-201ENST00000630360 2965 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 AC063926.3-201ENST00000624734 5658 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A1O00337 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A1O00337 LINC02447-202ENST00000501888 2146 ntBASIC15.85■□□□□ 0.13
SLC28A1O00337 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms