Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HLA-H-201ENST00000383620 1096 ntBASIC18.47■□□□□ 0.55
DDX39AO00148 MIR943-201ENST00000401286 94 ntBASIC18.47■□□□□ 0.55
DDX39AO00148 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.47■□□□□ 0.55
DDX39AO00148 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX39AO00148 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.47■□□□□ 0.55
DDX39AO00148 AC051619.7-201ENST00000568314 623 ntBASIC18.47■□□□□ 0.55
DDX39AO00148 AL390955.2-201ENST00000603032 514 ntBASIC18.47■□□□□ 0.55
DDX39AO00148 AC018529.1-201ENST00000613063 361 ntBASIC18.47■□□□□ 0.55
DDX39AO00148 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX39AO00148 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
DDX39AO00148 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX39AO00148 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX39AO00148 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX39AO00148 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX39AO00148 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX39AO00148 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX39AO00148 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX39AO00148 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
DDX39AO00148 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
DDX39AO00148 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX39AO00148 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX39AO00148 TREML5P-201ENST00000421694 576 ntBASIC18.46■□□□□ 0.55
DDX39AO00148 AC107890.1-201ENST00000422478 521 ntBASIC18.46■□□□□ 0.55
DDX39AO00148 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.46■□□□□ 0.55
DDX39AO00148 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX39AO00148 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX39AO00148 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DDX39AO00148 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX39AO00148 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
DDX39AO00148 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
DDX39AO00148 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
DDX39AO00148 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.45■□□□□ 0.54
DDX39AO00148 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.45■□□□□ 0.54
DDX39AO00148 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.45■□□□□ 0.54
DDX39AO00148 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.45■□□□□ 0.54
DDX39AO00148 AC098859.1-201ENST00000502915 1238 ntBASIC18.45■□□□□ 0.54
DDX39AO00148 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.45■□□□□ 0.54
DDX39AO00148 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.45■□□□□ 0.54
DDX39AO00148 AC015911.4-201ENST00000588022 1070 ntBASIC18.45■□□□□ 0.54
DDX39AO00148 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 AC005622.1-201ENST00000636801 1703 ntBASIC18.45■□□□□ 0.54
DDX39AO00148 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX39AO00148 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms