Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KLF2P3-201ENST00000451977 1087 ntBASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AC125807.1-201ENST00000483097 614 ntBASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 MIR4492-201ENST00000581627 80 ntBASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AC021097.1-201ENST00000607902 574 ntBASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AC009053.2-201ENST00000563701 2365 ntBASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SPDYE7P-202ENST00000420373 878 ntBASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 AP000842.3-202ENST00000569238 1080 ntBASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 MIR6080-201ENST00000617359 66 ntBASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 AL603756.1-201ENST00000606511 2163 ntBASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 AC008677.1-201ENST00000519230 1561 ntBASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA3F8WFD2 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms