Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GMNCA6NCL1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GMNCA6NCL1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
GMNCA6NCL1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GMNCA6NCL1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GMNCA6NCL1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GMNCA6NCL1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 KRT8P39-201ENST00000396270 1433 ntBASIC16.5■□□□□ 0.23
GMNCA6NCL1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GMNCA6NCL1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.5■□□□□ 0.23
GMNCA6NCL1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 ACTG1P4-201ENST00000425123 1122 ntBASIC16.49■□□□□ 0.23
GMNCA6NCL1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 ZNF444P1-201ENST00000559497 298 ntBASIC16.49■□□□□ 0.23
GMNCA6NCL1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 AC005332.3-201ENST00000589904 676 ntBASIC16.49■□□□□ 0.23
GMNCA6NCL1 PGM5P2-202ENST00000637225 1043 ntBASIC16.49■□□□□ 0.23
GMNCA6NCL1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GMNCA6NCL1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.49■□□□□ 0.23
GMNCA6NCL1 AC232323.1-201ENST00000540724 2099 ntBASIC16.49■□□□□ 0.23
GMNCA6NCL1 REXO1L5P-201ENST00000622260 2098 ntBASIC16.49■□□□□ 0.23
GMNCA6NCL1 FLJ16779-201ENST00000612722 7638 ntBASIC16.49■□□□□ 0.23
GMNCA6NCL1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms