Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 MIR940-201ENST00000401276 94 ntBASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 AC074386.1-202ENST00000463561 864 ntBASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 AC068137.2-201ENST00000605408 478 ntBASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 AC005622.1-201ENST00000636801 1703 ntBASIC16.48■□□□□ 0.23
CCDC162PA2VCL2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AL022342.1-201ENST00000400363 863 ntBASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 AP002472.1-201ENST00000577490 586 ntBASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC162PA2VCL2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms