Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 AC063952.2-201ENST00000498792 1227 ntBASIC14.35□□□□□ -0.11
SHISA3A0PJX4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 AC010331.1-201ENST00000611423 582 ntBASIC14.35□□□□□ -0.11
SHISA3A0PJX4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHISA3A0PJX4 NSUN5P1-202ENST00000421140 1535 ntBASIC14.35□□□□□ -0.11
SHISA3A0PJX4 NSUN5P2-203ENST00000457352 1529 ntBASIC14.35□□□□□ -0.11
SHISA3A0PJX4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CICP23-201ENST00000605013 2741 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 RCN1P1-201ENST00000400413 996 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 TMPOP1-202ENST00000424642 1267 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CHCHD2P8-201ENST00000429873 447 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC104076.2-201ENST00000448912 469 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC087163.2-201ENST00000457299 853 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC091167.2-201ENST00000579581 588 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC114341.1-201ENST00000618070 349 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 AC005622.1-201ENST00000636801 1703 ntBASIC14.34□□□□□ -0.11
SHISA3A0PJX4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHISA3A0PJX4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms