Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 AC012569.1-201ENST00000591191 1524 ntBASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12□□□□□ -0.49
TRGV1A0A0A0MS02 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 AC005052.1-201ENST00000625181 2492 ntBASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 TNRC18P3-201ENST00000441896 2691 ntBASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 PRSS29P-201ENST00000440800 595 ntBASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
TRGV1A0A0A0MS02 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 DOC2GP-204ENST00000639052 2548 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 OR2I1P-209ENST00000641730 5365 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 AL513480.1-201ENST00000451731 511 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 AC009078.2-202ENST00000463353 338 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 CXCL1P1-201ENST00000502804 216 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 1291.4 ms