Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 KRT8P26-201ENST00000534154 1276 ntBASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV18A0A075B6X5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 INTS4P1-201ENST00000438455 1935 ntBASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 LINC01144-201ENST00000626198 1710 ntBASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAV18A0A075B6X5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 OR2I1P-210ENST00000642037 4691 ntBASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 AP005901.3-202ENST00000581653 237 ntBASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 AL590326.2-201ENST00000625139 305 ntBASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV18A0A075B6X5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 AL590787.1-201ENST00000568856 1315 ntBASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV18A0A075B6X5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms