Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
DDX49Q9Y6V7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.11
DDX49Q9Y6V7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
DDX49Q9Y6V7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 SPCS2P3-201ENST00000500401 656 ntBASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 AC093536.1-201ENST00000569153 554 ntBASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 AC010501.1-201ENST00000606270 1962 ntBASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.24■■■□□ 2.11
DDX49Q9Y6V7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
DDX49Q9Y6V7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DDX49Q9Y6V7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DDX49Q9Y6V7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DDX49Q9Y6V7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DDX49Q9Y6V7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DDX49Q9Y6V7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
DDX49Q9Y6V7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.22■■■□□ 2.11
DDX49Q9Y6V7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
DDX49Q9Y6V7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX49Q9Y6V7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.22■■■□□ 2.11
DDX49Q9Y6V7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX49Q9Y6V7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX49Q9Y6V7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
DDX49Q9Y6V7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.21■■■□□ 2.11
DDX49Q9Y6V7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX49Q9Y6V7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
DDX49Q9Y6V7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.2■■■□□ 2.11
DDX49Q9Y6V7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
DDX49Q9Y6V7 DUX4L9-201ENST00000449051 1259 ntBASIC28.2■■■□□ 2.1
DDX49Q9Y6V7 RP9P-202ENST00000450133 1212 ntBASIC28.2■■■□□ 2.1
DDX49Q9Y6V7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
DDX49Q9Y6V7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX49Q9Y6V7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX49Q9Y6V7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 RAP2CP1-202ENST00000605179 643 ntBASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 AL139125.2-201ENST00000623134 1869 ntBASIC28.19■■■□□ 2.1
DDX49Q9Y6V7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX49Q9Y6V7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
DDX49Q9Y6V7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.18■■■□□ 2.1
DDX49Q9Y6V7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX49Q9Y6V7 AC138932.3-201ENST00000567634 1902 ntBASIC28.18■■■□□ 2.1
DDX49Q9Y6V7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
DDX49Q9Y6V7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
DDX49Q9Y6V7 AC022211.4-201ENST00000625094 2161 ntBASIC28.17■■■□□ 2.1
DDX49Q9Y6V7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 AL359504.2-201ENST00000605506 1601 ntBASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX49Q9Y6V7 WHAMMP3-201ENST00000611636 1609 ntBASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX49Q9Y6V7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX49Q9Y6V7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX49Q9Y6V7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.14■■■□□ 2.1
DDX49Q9Y6V7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX49Q9Y6V7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
DDX49Q9Y6V7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.14■■■□□ 2.09
DDX49Q9Y6V7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
DDX49Q9Y6V7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
DDX49Q9Y6V7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.13■■■□□ 2.09
DDX49Q9Y6V7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
DDX49Q9Y6V7 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.12■■■□□ 2.09
DDX49Q9Y6V7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.12■■■□□ 2.09
DDX49Q9Y6V7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DDX49Q9Y6V7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DDX49Q9Y6V7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
DDX49Q9Y6V7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
DDX49Q9Y6V7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
DDX49Q9Y6V7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DDX49Q9Y6V7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms