Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 AC145676.1-201ENST00000514988 2004 ntBASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCA3PQ9Y6N3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.31■■□□□ 1.16
CLCA3PQ9Y6N3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
CLCA3PQ9Y6N3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCA3PQ9Y6N3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCA3PQ9Y6N3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCA3PQ9Y6N3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 AC096887.2-201ENST00000623443 1957 ntBASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 DUSP8P4-201ENST00000399538 1761 ntBASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CLCA3PQ9Y6N3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCA3PQ9Y6N3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCA3PQ9Y6N3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCA3PQ9Y6N3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCA3PQ9Y6N3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCA3PQ9Y6N3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCA3PQ9Y6N3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.27■■□□□ 1.16
CLCA3PQ9Y6N3 AC010980.1-201ENST00000587192 1142 ntBASIC22.27■■□□□ 1.16
CLCA3PQ9Y6N3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCA3PQ9Y6N3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CLCA3PQ9Y6N3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCA3PQ9Y6N3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCA3PQ9Y6N3 AC097639.1-201ENST00000565519 1891 ntBASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CLCA3PQ9Y6N3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 LONRF2P2-201ENST00000439212 571 ntBASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCA3PQ9Y6N3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.22■■□□□ 1.15
CLCA3PQ9Y6N3 AC019171.1-201ENST00000601251 1056 ntBASIC22.22■■□□□ 1.15
CLCA3PQ9Y6N3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
CLCA3PQ9Y6N3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLCA3PQ9Y6N3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLCA3PQ9Y6N3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCA3PQ9Y6N3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.21■■□□□ 1.15
CLCA3PQ9Y6N3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCA3PQ9Y6N3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCA3PQ9Y6N3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.21■■□□□ 1.15
CLCA3PQ9Y6N3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLCA3PQ9Y6N3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.21■■□□□ 1.15
CLCA3PQ9Y6N3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms