Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LSM5Q9Y4Y9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 DUSP8P5-201ENST00000422884 1815 ntBASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM5Q9Y4Y9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 SUZ12P1-203ENST00000578195 985 ntBASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM5Q9Y4Y9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM5Q9Y4Y9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM5Q9Y4Y9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM5Q9Y4Y9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM5Q9Y4Y9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSM5Q9Y4Y9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSM5Q9Y4Y9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM5Q9Y4Y9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM5Q9Y4Y9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM5Q9Y4Y9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM5Q9Y4Y9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
LSM5Q9Y4Y9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM5Q9Y4Y9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 AC141586.4-201ENST00000624558 1573 ntBASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM5Q9Y4Y9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSM5Q9Y4Y9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 SLC6A10P-202ENST00000431994 2058 ntBASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
LSM5Q9Y4Y9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms