Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 AL592295.1-201ENST00000400984 884 ntBASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPH3AQ9Y2J0 KRT8P33-201ENST00000508125 1423 ntBASIC21.64■■□□□ 1.06
RPH3AQ9Y2J0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPH3AQ9Y2J0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPH3AQ9Y2J0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RPH3AQ9Y2J0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RPH3AQ9Y2J0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 PVT1_1.1-201ENST00000615125 194 ntBASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 AC074183.2-201ENST00000623112 922 ntBASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RPH3AQ9Y2J0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.62■■□□□ 1.05
RPH3AQ9Y2J0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPH3AQ9Y2J0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPH3AQ9Y2J0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 LONRF2P2-201ENST00000439212 571 ntBASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPH3AQ9Y2J0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPH3AQ9Y2J0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPH3AQ9Y2J0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPH3AQ9Y2J0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPH3AQ9Y2J0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.58■■□□□ 1.05
RPH3AQ9Y2J0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPH3AQ9Y2J0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPH3AQ9Y2J0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 AL035685.1-201ENST00000636663 812 ntBASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPH3AQ9Y2J0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPH3AQ9Y2J0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 AC097639.1-201ENST00000565519 1891 ntBASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPH3AQ9Y2J0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPH3AQ9Y2J0 YBX1P4-201ENST00000392794 808 ntBASIC21.54■■□□□ 1.04
RPH3AQ9Y2J0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPH3AQ9Y2J0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPH3AQ9Y2J0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPH3AQ9Y2J0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms