Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP13A1Q9HD20 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP13A1Q9HD20 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP13A1Q9HD20 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
ATP13A1Q9HD20 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 LONRF2P2-201ENST00000439212 571 ntBASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP13A1Q9HD20 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ATP13A1Q9HD20 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP13A1Q9HD20 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP13A1Q9HD20 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 AC019171.1-201ENST00000601251 1056 ntBASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 AC097639.1-201ENST00000565519 1891 ntBASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 KRT8P33-201ENST00000508125 1423 ntBASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP13A1Q9HD20 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.33■■□□□ 1.49
ATP13A1Q9HD20 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP13A1Q9HD20 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP13A1Q9HD20 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP13A1Q9HD20 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP13A1Q9HD20 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP13A1Q9HD20 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP13A1Q9HD20 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP13A1Q9HD20 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP13A1Q9HD20 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP13A1Q9HD20 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
ATP13A1Q9HD20 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP13A1Q9HD20 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ATP13A1Q9HD20 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP13A1Q9HD20 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP13A1Q9HD20 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP13A1Q9HD20 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP13A1Q9HD20 RARRES2P1-201ENST00000474487 481 ntBASIC24.3■■□□□ 1.48
ATP13A1Q9HD20 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP13A1Q9HD20 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP13A1Q9HD20 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP13A1Q9HD20 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP13A1Q9HD20 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP13A1Q9HD20 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.29■■□□□ 1.48
ATP13A1Q9HD20 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP13A1Q9HD20 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP13A1Q9HD20 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP13A1Q9HD20 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP13A1Q9HD20 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.29■■□□□ 1.48
ATP13A1Q9HD20 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP13A1Q9HD20 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP13A1Q9HD20 YBX1P4-201ENST00000392794 808 ntBASIC24.28■■□□□ 1.48
ATP13A1Q9HD20 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.28■■□□□ 1.48
ATP13A1Q9HD20 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP13A1Q9HD20 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP13A1Q9HD20 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ATP13A1Q9HD20 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.27■■□□□ 1.48
ATP13A1Q9HD20 AC103834.1-201ENST00000520383 144 ntBASIC24.27■■□□□ 1.48
ATP13A1Q9HD20 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.27■■□□□ 1.48
ATP13A1Q9HD20 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
ATP13A1Q9HD20 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP13A1Q9HD20 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP13A1Q9HD20 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
ATP13A1Q9HD20 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP13A1Q9HD20 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP13A1Q9HD20 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP13A1Q9HD20 MIR4508-201ENST00000584178 70 ntBASIC24.26■■□□□ 1.47
ATP13A1Q9HD20 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP13A1Q9HD20 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 AC020928.2-201ENST00000588717 2197 ntBASIC24.25■■□□□ 1.47
ATP13A1Q9HD20 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP13A1Q9HD20 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
ATP13A1Q9HD20 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
ATP13A1Q9HD20 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.24■■□□□ 1.47
ATP13A1Q9HD20 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.24■■□□□ 1.47
ATP13A1Q9HD20 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms