Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.16■□□□□ 0.98
SEC61A2Q9H9S3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SEC61A2Q9H9S3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.15■□□□□ 0.98
SEC61A2Q9H9S3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A2Q9H9S3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A2Q9H9S3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A2Q9H9S3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A2Q9H9S3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A2Q9H9S3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A2Q9H9S3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A2Q9H9S3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A2Q9H9S3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A2Q9H9S3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 AC097639.1-201ENST00000565519 1891 ntBASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEC61A2Q9H9S3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A2Q9H9S3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 SPCS2P3-201ENST00000500401 656 ntBASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A2Q9H9S3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 AC129492.7-201ENST00000622992 756 ntBASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A2Q9H9S3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 AC012354.3-201ENST00000623734 483 ntBASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SEC61A2Q9H9S3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A2Q9H9S3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A2Q9H9S3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A2Q9H9S3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A2Q9H9S3 AC004987.1-201ENST00000428627 508 ntBASIC21.08■□□□□ 0.97
SEC61A2Q9H9S3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.08■□□□□ 0.97
SEC61A2Q9H9S3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.08■□□□□ 0.96
SEC61A2Q9H9S3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.08■□□□□ 0.96
SEC61A2Q9H9S3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEC61A2Q9H9S3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A2Q9H9S3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SEC61A2Q9H9S3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SEC61A2Q9H9S3 AL033527.3-201ENST00000566366 1196 ntBASIC21.07■□□□□ 0.96
SEC61A2Q9H9S3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A2Q9H9S3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A2Q9H9S3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
SEC61A2Q9H9S3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A2Q9H9S3 DUX4L9-201ENST00000449051 1259 ntBASIC21.06■□□□□ 0.96
SEC61A2Q9H9S3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A2Q9H9S3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A2Q9H9S3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A2Q9H9S3 AC022211.4-201ENST00000625094 2161 ntBASIC21.06■□□□□ 0.96
SEC61A2Q9H9S3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 ATP5G2P3-201ENST00000429083 425 ntBASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 DUX4L18-201ENST00000553347 1267 ntBASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEC61A2Q9H9S3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.04■□□□□ 0.96
SEC61A2Q9H9S3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SEC61A2Q9H9S3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms