Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHMP4BQ9H444 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.93■■■□□ 2.38
CHMP4BQ9H444 AP003733.4-201ENST00000623785 1697 ntBASIC29.93■■■□□ 2.38
CHMP4BQ9H444 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
CHMP4BQ9H444 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
CHMP4BQ9H444 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHMP4BQ9H444 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 AC018755.3-202ENST00000596210 929 ntBASIC29.92■■■□□ 2.38
CHMP4BQ9H444 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CHMP4BQ9H444 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHMP4BQ9H444 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHMP4BQ9H444 AL592293.1-201ENST00000502889 1188 ntBASIC29.91■■■□□ 2.38
CHMP4BQ9H444 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
CHMP4BQ9H444 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHMP4BQ9H444 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHMP4BQ9H444 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.9■■■□□ 2.38
CHMP4BQ9H444 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHMP4BQ9H444 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.9■■■□□ 2.38
CHMP4BQ9H444 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.9■■■□□ 2.38
CHMP4BQ9H444 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHMP4BQ9H444 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHMP4BQ9H444 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC29.9■■■□□ 2.38
CHMP4BQ9H444 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHMP4BQ9H444 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHMP4BQ9H444 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHMP4BQ9H444 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHMP4BQ9H444 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHMP4BQ9H444 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CHMP4BQ9H444 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.37
CHMP4BQ9H444 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.37
CHMP4BQ9H444 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CHMP4BQ9H444 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHMP4BQ9H444 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.88■■■□□ 2.37
CHMP4BQ9H444 AC138932.3-201ENST00000567634 1902 ntBASIC29.88■■■□□ 2.37
CHMP4BQ9H444 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.87■■■□□ 2.37
CHMP4BQ9H444 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.87■■■□□ 2.37
CHMP4BQ9H444 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHMP4BQ9H444 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHMP4BQ9H444 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHMP4BQ9H444 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHMP4BQ9H444 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHMP4BQ9H444 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHMP4BQ9H444 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.86■■■□□ 2.37
CHMP4BQ9H444 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHMP4BQ9H444 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHMP4BQ9H444 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.85■■■□□ 2.37
CHMP4BQ9H444 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHMP4BQ9H444 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHMP4BQ9H444 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHMP4BQ9H444 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CHMP4BQ9H444 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.81■■■□□ 2.36
CHMP4BQ9H444 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.81■■■□□ 2.36
CHMP4BQ9H444 RPS2P7-201ENST00000447334 885 ntBASIC29.81■■■□□ 2.36
CHMP4BQ9H444 MIR6765-201ENST00000614092 87 ntBASIC29.81■■■□□ 2.36
CHMP4BQ9H444 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.81■■■□□ 2.36
CHMP4BQ9H444 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.81■■■□□ 2.36
CHMP4BQ9H444 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.81■■■□□ 2.36
CHMP4BQ9H444 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
CHMP4BQ9H444 U85056.1-201ENST00000616429 682 ntBASIC29.8■■■□□ 2.36
CHMP4BQ9H444 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CHMP4BQ9H444 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHMP4BQ9H444 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.79■■■□□ 2.36
CHMP4BQ9H444 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHMP4BQ9H444 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CHMP4BQ9H444 ABHD17AP5-201ENST00000580133 923 ntBASIC29.79■■■□□ 2.36
CHMP4BQ9H444 MIR6089-201ENST00000616698 64 ntBASIC29.79■■■□□ 2.36
CHMP4BQ9H444 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHMP4BQ9H444 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHMP4BQ9H444 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CHMP4BQ9H444 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
CHMP4BQ9H444 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC29.78■■■□□ 2.36
CHMP4BQ9H444 FOXO3B-201ENST00000395675 1928 ntBASIC29.78■■■□□ 2.36
CHMP4BQ9H444 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHMP4BQ9H444 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
CHMP4BQ9H444 SPCS2P3-201ENST00000500401 656 ntBASIC29.77■■■□□ 2.36
CHMP4BQ9H444 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CHMP4BQ9H444 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CHMP4BQ9H444 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.76■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms