Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATXN3LQ9H3M9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATXN3LQ9H3M9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
ATXN3LQ9H3M9 AL592295.1-201ENST00000400984 884 ntBASIC25■■□□□ 1.59
ATXN3LQ9H3M9 BX664725.1-201ENST00000438252 379 ntBASIC25■■□□□ 1.59
ATXN3LQ9H3M9 KRT125P-201ENST00000546827 989 ntBASIC25■■□□□ 1.59
ATXN3LQ9H3M9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
ATXN3LQ9H3M9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATXN3LQ9H3M9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATXN3LQ9H3M9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
ATXN3LQ9H3M9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.98■■□□□ 1.59
ATXN3LQ9H3M9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ATXN3LQ9H3M9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATXN3LQ9H3M9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
ATXN3LQ9H3M9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
ATXN3LQ9H3M9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.98■■□□□ 1.59
ATXN3LQ9H3M9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATXN3LQ9H3M9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ATXN3LQ9H3M9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATXN3LQ9H3M9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.97■■□□□ 1.59
ATXN3LQ9H3M9 AC120024.1-201ENST00000562672 995 ntBASIC24.97■■□□□ 1.59
ATXN3LQ9H3M9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATXN3LQ9H3M9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 MIR4787-201ENST00000607364 84 ntBASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
ATXN3LQ9H3M9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.95■■□□□ 1.59
ATXN3LQ9H3M9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.95■■□□□ 1.58
ATXN3LQ9H3M9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATXN3LQ9H3M9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATXN3LQ9H3M9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.95■■□□□ 1.58
ATXN3LQ9H3M9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.95■■□□□ 1.58
ATXN3LQ9H3M9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.95■■□□□ 1.58
ATXN3LQ9H3M9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATXN3LQ9H3M9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATXN3LQ9H3M9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.94■■□□□ 1.58
ATXN3LQ9H3M9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATXN3LQ9H3M9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.94■■□□□ 1.58
ATXN3LQ9H3M9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.94■■□□□ 1.58
ATXN3LQ9H3M9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
ATXN3LQ9H3M9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
ATXN3LQ9H3M9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
ATXN3LQ9H3M9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.93■■□□□ 1.58
ATXN3LQ9H3M9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.93■■□□□ 1.58
ATXN3LQ9H3M9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
ATXN3LQ9H3M9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ATXN3LQ9H3M9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ATXN3LQ9H3M9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ATXN3LQ9H3M9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ATXN3LQ9H3M9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.9■■□□□ 1.58
ATXN3LQ9H3M9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ATXN3LQ9H3M9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
ATXN3LQ9H3M9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
ATXN3LQ9H3M9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ATXN3LQ9H3M9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
ATXN3LQ9H3M9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ATXN3LQ9H3M9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.89■■□□□ 1.58
ATXN3LQ9H3M9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.89■■□□□ 1.58
ATXN3LQ9H3M9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.89■■□□□ 1.58
ATXN3LQ9H3M9 AC137630.3-201ENST00000607245 391 ntBASIC24.89■■□□□ 1.58
ATXN3LQ9H3M9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.88■■□□□ 1.57
ATXN3LQ9H3M9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.88■■□□□ 1.57
ATXN3LQ9H3M9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.88■■□□□ 1.57
ATXN3LQ9H3M9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
ATXN3LQ9H3M9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ATXN3LQ9H3M9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ATXN3LQ9H3M9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.87■■□□□ 1.57
ATXN3LQ9H3M9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
ATXN3LQ9H3M9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms