Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC114495.2-201ENST00000452686 437 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 GXYLT1P6-201ENST00000456472 1187 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AC114322.1-201ENST00000506771 926 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AC122134.1-202ENST00000569111 1201 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 TMF1P1-201ENST00000576058 373 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AP006261.1-201ENST00000584783 668 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AC095055.1-201ENST00000603472 1113 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AP000484.1-201ENST00000620067 1252 ntBASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-4Q9BYR3 TMOD2-202ENST00000435126 1490 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AL353732.1-201ENST00000569618 1459 ntBASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 MTND4P29-201ENST00000503122 1372 ntBASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 TM2D3-202ENST00000347970 1329 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 CRABP2-203ENST00000368222 992 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 HMGN1P14-201ENST00000412459 517 ntBASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AC090680.1-201ENST00000464696 860 ntBASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 CSTA-202ENST00000479204 821 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AP002981.1-201ENST00000517692 975 ntBASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-4Q9BYR3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 HLA-V-202ENST00000446817 847 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 ZNRF2P2-203ENST00000454624 420 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AL022319.1-201ENST00000458183 1167 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 MTND1P8-201ENST00000571424 950 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC093726.2-201ENST00000609134 679 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC104237.3-201ENST00000611809 427 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC084781.1-201ENST00000613737 656 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AC006213.5-201ENST00000619673 288 ntBASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 AL161658.1-201ENST00000623641 1967 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms