Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.87■□□□□ 0.77
CCL13Q99616 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.87■□□□□ 0.77
CCL13Q99616 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL13Q99616 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL13Q99616 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL13Q99616 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCL13Q99616 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCL13Q99616 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL13Q99616 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCL13Q99616 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL13Q99616 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCL13Q99616 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL13Q99616 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.85■□□□□ 0.77
CCL13Q99616 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.85■□□□□ 0.77
CCL13Q99616 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL13Q99616 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL13Q99616 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL13Q99616 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL13Q99616 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL13Q99616 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL13Q99616 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.84■□□□□ 0.77
CCL13Q99616 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL13Q99616 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.84■□□□□ 0.77
CCL13Q99616 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.84■□□□□ 0.77
CCL13Q99616 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCL13Q99616 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.84■□□□□ 0.77
CCL13Q99616 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCL13Q99616 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCL13Q99616 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCL13Q99616 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCL13Q99616 AC010980.1-201ENST00000587192 1142 ntBASIC19.83■□□□□ 0.77
CCL13Q99616 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL13Q99616 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL13Q99616 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCL13Q99616 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL13Q99616 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL13Q99616 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL13Q99616 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCL13Q99616 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL13Q99616 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL13Q99616 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCL13Q99616 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL13Q99616 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.82■□□□□ 0.76
CCL13Q99616 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCL13Q99616 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCL13Q99616 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL13Q99616 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.81■□□□□ 0.76
CCL13Q99616 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.81■□□□□ 0.76
CCL13Q99616 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.81■□□□□ 0.76
CCL13Q99616 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL13Q99616 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.81■□□□□ 0.76
CCL13Q99616 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCL13Q99616 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL13Q99616 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCL13Q99616 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL13Q99616 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL13Q99616 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCL13Q99616 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL13Q99616 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
CCL13Q99616 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCL13Q99616 LONRF2P2-201ENST00000439212 571 ntBASIC19.8■□□□□ 0.76
CCL13Q99616 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.8■□□□□ 0.76
CCL13Q99616 AC074183.2-201ENST00000623112 922 ntBASIC19.8■□□□□ 0.76
CCL13Q99616 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCL13Q99616 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCL13Q99616 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.79■□□□□ 0.76
CCL13Q99616 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL13Q99616 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL13Q99616 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCL13Q99616 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL13Q99616 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCL13Q99616 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL13Q99616 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCL13Q99616 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.78■□□□□ 0.76
CCL13Q99616 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL13Q99616 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL13Q99616 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL13Q99616 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL13Q99616 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.77■□□□□ 0.76
CCL13Q99616 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL13Q99616 PVT1_1.1-201ENST00000615125 194 ntBASIC19.77■□□□□ 0.76
CCL13Q99616 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL13Q99616 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.77■□□□□ 0.76
CCL13Q99616 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.77■□□□□ 0.76
CCL13Q99616 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCL13Q99616 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms