Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.9■■□□□ 1.58
NOTCH4Q99466 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NOTCH4Q99466 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.9■■□□□ 1.58
NOTCH4Q99466 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
NOTCH4Q99466 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NOTCH4Q99466 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NOTCH4Q99466 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NOTCH4Q99466 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NOTCH4Q99466 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.89■■□□□ 1.57
NOTCH4Q99466 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NOTCH4Q99466 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NOTCH4Q99466 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NOTCH4Q99466 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.88■■□□□ 1.57
NOTCH4Q99466 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.88■■□□□ 1.57
NOTCH4Q99466 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NOTCH4Q99466 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
NOTCH4Q99466 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.87■■□□□ 1.57
NOTCH4Q99466 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.87■■□□□ 1.57
NOTCH4Q99466 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.87■■□□□ 1.57
NOTCH4Q99466 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.86■■□□□ 1.57
NOTCH4Q99466 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NOTCH4Q99466 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.86■■□□□ 1.57
NOTCH4Q99466 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
NOTCH4Q99466 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NOTCH4Q99466 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.85■■□□□ 1.57
NOTCH4Q99466 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NOTCH4Q99466 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
NOTCH4Q99466 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.85■■□□□ 1.57
NOTCH4Q99466 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.85■■□□□ 1.57
NOTCH4Q99466 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.85■■□□□ 1.57
NOTCH4Q99466 AC142086.6-201ENST00000621154 1765 ntBASIC24.85■■□□□ 1.57
NOTCH4Q99466 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.85■■□□□ 1.57
NOTCH4Q99466 TSPY9P-201ENST00000440215 945 ntBASIC24.85■■□□□ 1.57
NOTCH4Q99466 TSPY11P-201ENST00000442607 1045 ntBASIC24.85■■□□□ 1.57
NOTCH4Q99466 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.85■■□□□ 1.57
NOTCH4Q99466 AC011551.1-201ENST00000614101 683 ntBASIC24.85■■□□□ 1.57
NOTCH4Q99466 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NOTCH4Q99466 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.84■■□□□ 1.57
NOTCH4Q99466 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.84■■□□□ 1.57
NOTCH4Q99466 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.84■■□□□ 1.57
NOTCH4Q99466 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.84■■□□□ 1.57
NOTCH4Q99466 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NOTCH4Q99466 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NOTCH4Q99466 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NOTCH4Q99466 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NOTCH4Q99466 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.83■■□□□ 1.57
NOTCH4Q99466 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.83■■□□□ 1.57
NOTCH4Q99466 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
NOTCH4Q99466 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NOTCH4Q99466 MIR638-201ENST00000385237 100 ntBASIC24.82■■□□□ 1.56
NOTCH4Q99466 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NOTCH4Q99466 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.82■■□□□ 1.56
NOTCH4Q99466 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.82■■□□□ 1.56
NOTCH4Q99466 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NOTCH4Q99466 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
NOTCH4Q99466 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.81■■□□□ 1.56
NOTCH4Q99466 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NOTCH4Q99466 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NOTCH4Q99466 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.81■■□□□ 1.56
NOTCH4Q99466 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NOTCH4Q99466 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
NOTCH4Q99466 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.81■■□□□ 1.56
NOTCH4Q99466 AL117332.1-201ENST00000622628 974 ntBASIC24.81■■□□□ 1.56
NOTCH4Q99466 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.81■■□□□ 1.56
NOTCH4Q99466 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NOTCH4Q99466 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.8■■□□□ 1.56
NOTCH4Q99466 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.8■■□□□ 1.56
NOTCH4Q99466 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.8■■□□□ 1.56
NOTCH4Q99466 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
NOTCH4Q99466 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NOTCH4Q99466 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.8■■□□□ 1.56
NOTCH4Q99466 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NOTCH4Q99466 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.8■■□□□ 1.56
NOTCH4Q99466 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
NOTCH4Q99466 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
NOTCH4Q99466 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
NOTCH4Q99466 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NOTCH4Q99466 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.79■■□□□ 1.56
NOTCH4Q99466 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.79■■□□□ 1.56
NOTCH4Q99466 MIR4466-201ENST00000606121 54 ntBASIC24.79■■□□□ 1.56
NOTCH4Q99466 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NOTCH4Q99466 AF131216.4-201ENST00000638924 1588 ntBASIC24.79■■□□□ 1.56
NOTCH4Q99466 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NOTCH4Q99466 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
NOTCH4Q99466 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.78■■□□□ 1.56
NOTCH4Q99466 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.78■■□□□ 1.56
NOTCH4Q99466 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
NOTCH4Q99466 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NOTCH4Q99466 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
NOTCH4Q99466 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NOTCH4Q99466 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.77■■□□□ 1.56
NOTCH4Q99466 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.77■■□□□ 1.56
NOTCH4Q99466 AL512631.2-201ENST00000604634 923 ntBASIC24.77■■□□□ 1.56
NOTCH4Q99466 MIR6724-1-201ENST00000616420 92 ntBASIC24.77■■□□□ 1.56
NOTCH4Q99466 MIR6724-2-201ENST00000616483 92 ntBASIC24.77■■□□□ 1.56
NOTCH4Q99466 MIR6724-4-201ENST00000617390 92 ntBASIC24.77■■□□□ 1.56
NOTCH4Q99466 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NOTCH4Q99466 MIR6724-3-201ENST00000622482 92 ntBASIC24.77■■□□□ 1.56
NOTCH4Q99466 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NOTCH4Q99466 MIR3621-201ENST00000580529 85 ntBASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms